Gene : Solyc12g039210.1 S. lycopersicum ITAG2.4
Defline:  (1 of 21) PTHR16007//PTHR16007:SF33 - EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED // SUBFAMILY NOT NAMED Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR019557 Aminotransferase-like, plant mobile domain
Genomic Order:  1463 Name:  ? Solyc12g039210.1
Secondary Identifier:  ? PAC:36148083
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc12g039210.1 0.5kb upstream 0.5kb upstream 995 true SL2.50ch12: 45139703-45140697 Solanum lycopersicum
Solyc12g039210.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch12: 45140198-45140697 Solanum lycopersicum
Solyc12g039210.1 0.5kb downstream 0.5kb downstream 995 true SL2.50ch12: 45139203-45140197 Solanum lycopersicum
Solyc12g039210.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch12: 45139203-45139702 Solanum lycopersicum
Solyc12g039210.1 1.0kb upstream 1.0kb upstream 1495 true SL2.50ch12: 45139703-45141197 Solanum lycopersicum
Solyc12g039210.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch12: 45140198-45141197 Solanum lycopersicum
Solyc12g039210.1 1.0kb downstream 1.0kb downstream 1495 true SL2.50ch12: 45138703-45140197 Solanum lycopersicum
Solyc12g039210.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch12: 45138703-45139702 Solanum lycopersicum
Solyc12g039210.1 2.0kb upstream 2.0kb upstream 2495 true SL2.50ch12: 45139703-45142197 Solanum lycopersicum
Solyc12g039210.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch12: 45140198-45142197 Solanum lycopersicum
Solyc12g039210.1 2.0kb downstream 2.0kb downstream 2495 true SL2.50ch12: 45137703-45140197 Solanum lycopersicum
Solyc12g039210.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch12: 45137703-45139702 Solanum lycopersicum
Solyc12g039210.1 5.0kb upstream 5.0kb upstream 5495 true SL2.50ch12: 45139703-45145197 Solanum lycopersicum
Solyc12g039210.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch12: 45140198-45145197 Solanum lycopersicum
Solyc12g039210.1 5.0kb downstream 5.0kb downstream 5495 true SL2.50ch12: 45134703-45140197 Solanum lycopersicum
Solyc12g039210.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch12: 45134703-45139702 Solanum lycopersicum
Solyc12g039210.1 10.0kb upstream 10.0kb upstream 10495 true SL2.50ch12: 45139703-45150197 Solanum lycopersicum
Solyc12g039210.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch12: 45140198-45150197 Solanum lycopersicum
Solyc12g039210.1 10.0kb downstream 10.0kb downstream 10495 true SL2.50ch12: 45129703-45140197 Solanum lycopersicum
Solyc12g039210.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch12: 45129703-45139702 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027649 5273 Angiosperm View MSA
121389012 5263 Asterids View MSA
123752946 5271 Pentapetalae View MSA
122774876 5272 Eudicot View MSA
121297275 5274 Embryophyte View MSA
123335348 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain