Gene : Solyc08g069080.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K12832 - splicing factor 3B subunit 5 (SF3B5, SF3B10) Description:  Splicing factor 3B subunit 5 (AHRD V1 ***- B0XFY1_CULQU); contains Interpro domain(s) IPR017089 Splicing factor 3B, subunit 5
Genomic Order:  1544 Name:  ? Solyc08g069080.2
Secondary Identifier:  ? PAC:36150707
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g069080.2 0.5kb upstream 0.5kb upstream 3865 true SL2.50ch08: 58160373-58164237 Solanum lycopersicum
Solyc08g069080.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 58160373-58160872 Solanum lycopersicum
Solyc08g069080.2 0.5kb downstream 0.5kb downstream 3865 true SL2.50ch08: 58160873-58164737 Solanum lycopersicum
Solyc08g069080.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 58164238-58164737 Solanum lycopersicum
Solyc08g069080.2 1.0kb upstream 1.0kb upstream 4365 true SL2.50ch08: 58159873-58164237 Solanum lycopersicum
Solyc08g069080.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 58159873-58160872 Solanum lycopersicum
Solyc08g069080.2 1.0kb downstream 1.0kb downstream 4365 true SL2.50ch08: 58160873-58165237 Solanum lycopersicum
Solyc08g069080.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 58164238-58165237 Solanum lycopersicum
Solyc08g069080.2 2.0kb upstream 2.0kb upstream 5365 true SL2.50ch08: 58158873-58164237 Solanum lycopersicum
Solyc08g069080.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 58158873-58160872 Solanum lycopersicum
Solyc08g069080.2 2.0kb downstream 2.0kb downstream 5365 true SL2.50ch08: 58160873-58166237 Solanum lycopersicum
Solyc08g069080.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 58164238-58166237 Solanum lycopersicum
Solyc08g069080.2 5.0kb upstream 5.0kb upstream 8365 true SL2.50ch08: 58155873-58164237 Solanum lycopersicum
Solyc08g069080.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 58155873-58160872 Solanum lycopersicum
Solyc08g069080.2 5.0kb downstream 5.0kb downstream 8365 true SL2.50ch08: 58160873-58169237 Solanum lycopersicum
Solyc08g069080.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 58164238-58169237 Solanum lycopersicum
Solyc08g069080.2 10.0kb upstream 10.0kb upstream 13365 true SL2.50ch08: 58150873-58164237 Solanum lycopersicum
Solyc08g069080.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 58150873-58160872 Solanum lycopersicum
Solyc08g069080.2 10.0kb downstream 10.0kb downstream 13365 true SL2.50ch08: 58160873-58174237 Solanum lycopersicum
Solyc08g069080.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 58164238-58174237 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027648 5273 Angiosperm View MSA
121473649 5263 Asterids View MSA
123746421 5271 Pentapetalae View MSA
122791090 5272 Eudicot View MSA
123428927 5275 Viridiplantae View MSA
121347588 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain