Gene : Solyc08g069050.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR24006:SF503 - TRAF-LIKE FAMILY PROTEIN-RELATED Description:  Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V1 ***- D7LIB1_ARALY); contains Interpro domain(s) IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
Genomic Order:  1541 Name:  ? Solyc08g069050.2
Secondary Identifier:  ? PAC:36150718
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g069050.2 0.5kb upstream 0.5kb upstream 9591 true SL2.50ch08: 58127853-58137443 Solanum lycopersicum
Solyc08g069050.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 58136944-58137443 Solanum lycopersicum
Solyc08g069050.2 0.5kb downstream 0.5kb downstream 9591 true SL2.50ch08: 58127353-58136943 Solanum lycopersicum
Solyc08g069050.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 58127353-58127852 Solanum lycopersicum
Solyc08g069050.2 1.0kb upstream 1.0kb upstream 10091 true SL2.50ch08: 58127853-58137943 Solanum lycopersicum
Solyc08g069050.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 58136944-58137943 Solanum lycopersicum
Solyc08g069050.2 1.0kb downstream 1.0kb downstream 10091 true SL2.50ch08: 58126853-58136943 Solanum lycopersicum
Solyc08g069050.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 58126853-58127852 Solanum lycopersicum
Solyc08g069050.2 2.0kb upstream 2.0kb upstream 11091 true SL2.50ch08: 58127853-58138943 Solanum lycopersicum
Solyc08g069050.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 58136944-58138943 Solanum lycopersicum
Solyc08g069050.2 2.0kb downstream 2.0kb downstream 11091 true SL2.50ch08: 58125853-58136943 Solanum lycopersicum
Solyc08g069050.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 58125853-58127852 Solanum lycopersicum
Solyc08g069050.2 5.0kb upstream 5.0kb upstream 14091 true SL2.50ch08: 58127853-58141943 Solanum lycopersicum
Solyc08g069050.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 58136944-58141943 Solanum lycopersicum
Solyc08g069050.2 5.0kb downstream 5.0kb downstream 14091 true SL2.50ch08: 58122853-58136943 Solanum lycopersicum
Solyc08g069050.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 58122853-58127852 Solanum lycopersicum
Solyc08g069050.2 10.0kb upstream 10.0kb upstream 19091 true SL2.50ch08: 58127853-58146943 Solanum lycopersicum
Solyc08g069050.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 58136944-58146943 Solanum lycopersicum
Solyc08g069050.2 10.0kb downstream 10.0kb downstream 19091 true SL2.50ch08: 58117853-58136943 Solanum lycopersicum
Solyc08g069050.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 58117853-58127852 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469887 5263 Asterids View MSA
123738264 5271 Pentapetalae View MSA
122797340 5272 Eudicot View MSA
122048060 5273 Angiosperm View MSA
121350818 5274 Embryophyte View MSA
123428412 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain