Gene : Solyc08g076080.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31062:SF16 - XYLOGLUCAN ENDOTRANSGLUCOSYLASE/HYDROLASE PROTEIN 29-RELATED Description:  Xyloglucan endotransglucosylase/hydrolase 14 (AHRD V1 **** C0IRH3_ACTDE); contains Interpro domain(s) IPR000757 Glycoside hydrolase, family 16
Genomic Order:  1742 Name:  ? Solyc08g076080.2
Secondary Identifier:  ? PAC:36150166
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g076080.2 0.5kb upstream 0.5kb upstream 4695 true SL2.50ch08: 60127904-60132598 Solanum lycopersicum
Solyc08g076080.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 60132099-60132598 Solanum lycopersicum
Solyc08g076080.2 0.5kb downstream 0.5kb downstream 4695 true SL2.50ch08: 60127404-60132098 Solanum lycopersicum
Solyc08g076080.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 60127404-60127903 Solanum lycopersicum
Solyc08g076080.2 1.0kb upstream 1.0kb upstream 5195 true SL2.50ch08: 60127904-60133098 Solanum lycopersicum
Solyc08g076080.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 60132099-60133098 Solanum lycopersicum
Solyc08g076080.2 1.0kb downstream 1.0kb downstream 5195 true SL2.50ch08: 60126904-60132098 Solanum lycopersicum
Solyc08g076080.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 60126904-60127903 Solanum lycopersicum
Solyc08g076080.2 2.0kb upstream 2.0kb upstream 6195 true SL2.50ch08: 60127904-60134098 Solanum lycopersicum
Solyc08g076080.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 60132099-60134098 Solanum lycopersicum
Solyc08g076080.2 2.0kb downstream 2.0kb downstream 6195 true SL2.50ch08: 60125904-60132098 Solanum lycopersicum
Solyc08g076080.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 60125904-60127903 Solanum lycopersicum
Solyc08g076080.2 5.0kb upstream 5.0kb upstream 9195 true SL2.50ch08: 60127904-60137098 Solanum lycopersicum
Solyc08g076080.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 60132099-60137098 Solanum lycopersicum
Solyc08g076080.2 5.0kb downstream 5.0kb downstream 9195 true SL2.50ch08: 60122904-60132098 Solanum lycopersicum
Solyc08g076080.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 60122904-60127903 Solanum lycopersicum
Solyc08g076080.2 10.0kb upstream 10.0kb upstream 14195 true SL2.50ch08: 60127904-60142098 Solanum lycopersicum
Solyc08g076080.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 60132099-60142098 Solanum lycopersicum
Solyc08g076080.2 10.0kb downstream 10.0kb downstream 14195 true SL2.50ch08: 60117904-60132098 Solanum lycopersicum
Solyc08g076080.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 60117904-60127903 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471455 5263 Asterids View MSA
123745319 5271 Pentapetalae View MSA
122794660 5272 Eudicot View MSA
122049542 5273 Angiosperm View MSA
121347970 5274 Embryophyte View MSA
123380694 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain