Gene : Solyc08g075300.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR13586:SF3 - DECAPPING 5-LIKE PROTEIN-RELATED Description:  Protein LSM14 homolog A-B (AHRD V1 *--- L14AB_XENLA); contains Interpro domain(s) IPR019053 FFD and TFG box motifs
Genomic Order:  1664 Name:  ? Solyc08g075300.2
Secondary Identifier:  ? PAC:36151465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g075300.2 0.5kb upstream 0.5kb upstream 9371 true SL2.50ch08: 59388330-59397700 Solanum lycopersicum
Solyc08g075300.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 59397201-59397700 Solanum lycopersicum
Solyc08g075300.2 0.5kb downstream 0.5kb downstream 9371 true SL2.50ch08: 59387830-59397200 Solanum lycopersicum
Solyc08g075300.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 59387830-59388329 Solanum lycopersicum
Solyc08g075300.2 1.0kb upstream 1.0kb upstream 9871 true SL2.50ch08: 59388330-59398200 Solanum lycopersicum
Solyc08g075300.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 59397201-59398200 Solanum lycopersicum
Solyc08g075300.2 1.0kb downstream 1.0kb downstream 9871 true SL2.50ch08: 59387330-59397200 Solanum lycopersicum
Solyc08g075300.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 59387330-59388329 Solanum lycopersicum
Solyc08g075300.2 2.0kb upstream 2.0kb upstream 10871 true SL2.50ch08: 59388330-59399200 Solanum lycopersicum
Solyc08g075300.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 59397201-59399200 Solanum lycopersicum
Solyc08g075300.2 2.0kb downstream 2.0kb downstream 10871 true SL2.50ch08: 59386330-59397200 Solanum lycopersicum
Solyc08g075300.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 59386330-59388329 Solanum lycopersicum
Solyc08g075300.2 5.0kb upstream 5.0kb upstream 13871 true SL2.50ch08: 59388330-59402200 Solanum lycopersicum
Solyc08g075300.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 59397201-59402200 Solanum lycopersicum
Solyc08g075300.2 5.0kb downstream 5.0kb downstream 13871 true SL2.50ch08: 59383330-59397200 Solanum lycopersicum
Solyc08g075300.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 59383330-59388329 Solanum lycopersicum
Solyc08g075300.2 10.0kb upstream 10.0kb upstream 18871 true SL2.50ch08: 59388330-59407200 Solanum lycopersicum
Solyc08g075300.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 59397201-59407200 Solanum lycopersicum
Solyc08g075300.2 10.0kb downstream 10.0kb downstream 18871 true SL2.50ch08: 59378330-59397200 Solanum lycopersicum
Solyc08g075300.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 59378330-59388329 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779803 5273 Angiosperm View MSA
121369817 5263 Asterids Singleton cluster - no MSA
123744219 5271 Pentapetalae View MSA
122770960 5272 Eudicot View MSA
121051442 5274 Embryophyte View MSA
123428687 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain