Gene : Solyc08g075010.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12121:SF42 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 4-RELATED Description:  Glucose-repressible alcohol dehydrogenase transcriptional effector (AHRD V1 **-- D6RLR7_COPC7); contains Interpro domain(s) IPR005135 Endonuclease/exonuclease/phosphatase
Genomic Order:  1636 Name:  ? Solyc08g075010.2
Secondary Identifier:  ? PAC:36149249
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g075010.2 0.5kb upstream 0.5kb upstream 11570 true SL2.50ch08: 59147651-59159220 Solanum lycopersicum
Solyc08g075010.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 59158721-59159220 Solanum lycopersicum
Solyc08g075010.2 0.5kb downstream 0.5kb downstream 11570 true SL2.50ch08: 59147151-59158720 Solanum lycopersicum
Solyc08g075010.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 59147151-59147650 Solanum lycopersicum
Solyc08g075010.2 1.0kb upstream 1.0kb upstream 12070 true SL2.50ch08: 59147651-59159720 Solanum lycopersicum
Solyc08g075010.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 59158721-59159720 Solanum lycopersicum
Solyc08g075010.2 1.0kb downstream 1.0kb downstream 12070 true SL2.50ch08: 59146651-59158720 Solanum lycopersicum
Solyc08g075010.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 59146651-59147650 Solanum lycopersicum
Solyc08g075010.2 2.0kb upstream 2.0kb upstream 13070 true SL2.50ch08: 59147651-59160720 Solanum lycopersicum
Solyc08g075010.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 59158721-59160720 Solanum lycopersicum
Solyc08g075010.2 2.0kb downstream 2.0kb downstream 13070 true SL2.50ch08: 59145651-59158720 Solanum lycopersicum
Solyc08g075010.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 59145651-59147650 Solanum lycopersicum
Solyc08g075010.2 5.0kb upstream 5.0kb upstream 16070 true SL2.50ch08: 59147651-59163720 Solanum lycopersicum
Solyc08g075010.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 59158721-59163720 Solanum lycopersicum
Solyc08g075010.2 5.0kb downstream 5.0kb downstream 16070 true SL2.50ch08: 59142651-59158720 Solanum lycopersicum
Solyc08g075010.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 59142651-59147650 Solanum lycopersicum
Solyc08g075010.2 10.0kb upstream 10.0kb upstream 21070 true SL2.50ch08: 59147651-59168720 Solanum lycopersicum
Solyc08g075010.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 59158721-59168720 Solanum lycopersicum
Solyc08g075010.2 10.0kb downstream 10.0kb downstream 21070 true SL2.50ch08: 59137651-59158720 Solanum lycopersicum
Solyc08g075010.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 59137651-59147650 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474804 5263 Asterids View MSA
123740747 5271 Pentapetalae View MSA
122787902 5272 Eudicot View MSA
122047277 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain