Gene : Solyc08g067420.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12121:SF48 - CARBON CATABOLITE REPRESSOR PROTEIN 4 HOMOLOG 6 Description:  Glucose-repressible alcohol dehydrogenase transcriptional effector (AHRD V1 *--- D6RLR7_COPC7); contains Interpro domain(s) IPR005135 Endonuclease/exonuclease/phosphatase
Genomic Order:  1383 Name:  ? Solyc08g067420.2
Secondary Identifier:  ? PAC:36150623
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g067420.2 0.5kb upstream 0.5kb upstream 16063 true SL2.50ch08: 56461240-56477302 Solanum lycopersicum
Solyc08g067420.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 56476803-56477302 Solanum lycopersicum
Solyc08g067420.2 0.5kb downstream 0.5kb downstream 16063 true SL2.50ch08: 56460740-56476802 Solanum lycopersicum
Solyc08g067420.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 56460740-56461239 Solanum lycopersicum
Solyc08g067420.2 1.0kb upstream 1.0kb upstream 16563 true SL2.50ch08: 56461240-56477802 Solanum lycopersicum
Solyc08g067420.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 56476803-56477802 Solanum lycopersicum
Solyc08g067420.2 1.0kb downstream 1.0kb downstream 16563 true SL2.50ch08: 56460240-56476802 Solanum lycopersicum
Solyc08g067420.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 56460240-56461239 Solanum lycopersicum
Solyc08g067420.2 2.0kb upstream 2.0kb upstream 17563 true SL2.50ch08: 56461240-56478802 Solanum lycopersicum
Solyc08g067420.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 56476803-56478802 Solanum lycopersicum
Solyc08g067420.2 2.0kb downstream 2.0kb downstream 17563 true SL2.50ch08: 56459240-56476802 Solanum lycopersicum
Solyc08g067420.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 56459240-56461239 Solanum lycopersicum
Solyc08g067420.2 5.0kb upstream 5.0kb upstream 20563 true SL2.50ch08: 56461240-56481802 Solanum lycopersicum
Solyc08g067420.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 56476803-56481802 Solanum lycopersicum
Solyc08g067420.2 5.0kb downstream 5.0kb downstream 20563 true SL2.50ch08: 56456240-56476802 Solanum lycopersicum
Solyc08g067420.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 56456240-56461239 Solanum lycopersicum
Solyc08g067420.2 10.0kb upstream 10.0kb upstream 25563 true SL2.50ch08: 56461240-56486802 Solanum lycopersicum
Solyc08g067420.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 56476803-56486802 Solanum lycopersicum
Solyc08g067420.2 10.0kb downstream 10.0kb downstream 25563 true SL2.50ch08: 56451240-56476802 Solanum lycopersicum
Solyc08g067420.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 56451240-56461239 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468709 5263 Asterids View MSA
123737672 5271 Pentapetalae View MSA
122788229 5272 Eudicot View MSA
122041541 5273 Angiosperm View MSA
121350616 5274 Embryophyte View MSA
123428031 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain