Gene : Solyc08g029110.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K06990 - uncharacterized protein (K06990) Description:  DUF52 domain-containing protein (AHRD V1 **-- C5FFY6_NANOT); contains Interpro domain(s) IPR002737 UPF0103/Mediator of ErbB2-driven cell motility (Memo), related
Genomic Order:  880 Name:  ? Solyc08g029110.2
Secondary Identifier:  ? PAC:36150821
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g029110.2 0.5kb upstream 0.5kb upstream 9917 true SL2.50ch08: 38214786-38224702 Solanum lycopersicum
Solyc08g029110.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 38214786-38215285 Solanum lycopersicum
Solyc08g029110.2 0.5kb downstream 0.5kb downstream 9917 true SL2.50ch08: 38215286-38225202 Solanum lycopersicum
Solyc08g029110.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 38224703-38225202 Solanum lycopersicum
Solyc08g029110.2 1.0kb upstream 1.0kb upstream 10417 true SL2.50ch08: 38214286-38224702 Solanum lycopersicum
Solyc08g029110.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 38214286-38215285 Solanum lycopersicum
Solyc08g029110.2 1.0kb downstream 1.0kb downstream 10417 true SL2.50ch08: 38215286-38225702 Solanum lycopersicum
Solyc08g029110.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 38224703-38225702 Solanum lycopersicum
Solyc08g029110.2 2.0kb upstream 2.0kb upstream 11417 true SL2.50ch08: 38213286-38224702 Solanum lycopersicum
Solyc08g029110.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 38213286-38215285 Solanum lycopersicum
Solyc08g029110.2 2.0kb downstream 2.0kb downstream 11417 true SL2.50ch08: 38215286-38226702 Solanum lycopersicum
Solyc08g029110.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 38224703-38226702 Solanum lycopersicum
Solyc08g029110.2 5.0kb upstream 5.0kb upstream 14417 true SL2.50ch08: 38210286-38224702 Solanum lycopersicum
Solyc08g029110.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 38210286-38215285 Solanum lycopersicum
Solyc08g029110.2 5.0kb downstream 5.0kb downstream 14417 true SL2.50ch08: 38215286-38229702 Solanum lycopersicum
Solyc08g029110.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 38224703-38229702 Solanum lycopersicum
Solyc08g029110.2 10.0kb upstream 10.0kb upstream 19417 true SL2.50ch08: 38205286-38224702 Solanum lycopersicum
Solyc08g029110.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 38205286-38215285 Solanum lycopersicum
Solyc08g029110.2 10.0kb downstream 10.0kb downstream 19417 true SL2.50ch08: 38215286-38234702 Solanum lycopersicum
Solyc08g029110.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 38224703-38234702 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471943 5263 Asterids View MSA
123739302 5271 Pentapetalae View MSA
122792627 5272 Eudicot View MSA
122043958 5273 Angiosperm View MSA
121344189 5274 Embryophyte View MSA
123424633 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain