Gene : Solyc08g041980.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) KOG3306 - Predicted membrane protein Description:  C15orf24 homolog (AHRD V1 ***- C1BJZ2_OSMMO); contains Interpro domain(s) IPR019008 Protein of unknown function DUF2012
Genomic Order:  739 Name:  ? Solyc08g041980.2
Secondary Identifier:  ? PAC:36151093
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g041980.2 0.5kb upstream 0.5kb upstream 13538 true SL2.50ch08: 24447989-24461526 Solanum lycopersicum
Solyc08g041980.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 24461027-24461526 Solanum lycopersicum
Solyc08g041980.2 0.5kb downstream 0.5kb downstream 13538 true SL2.50ch08: 24447489-24461026 Solanum lycopersicum
Solyc08g041980.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 24447489-24447988 Solanum lycopersicum
Solyc08g041980.2 1.0kb upstream 1.0kb upstream 14038 true SL2.50ch08: 24447989-24462026 Solanum lycopersicum
Solyc08g041980.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 24461027-24462026 Solanum lycopersicum
Solyc08g041980.2 1.0kb downstream 1.0kb downstream 14038 true SL2.50ch08: 24446989-24461026 Solanum lycopersicum
Solyc08g041980.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 24446989-24447988 Solanum lycopersicum
Solyc08g041980.2 2.0kb upstream 2.0kb upstream 15038 true SL2.50ch08: 24447989-24463026 Solanum lycopersicum
Solyc08g041980.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 24461027-24463026 Solanum lycopersicum
Solyc08g041980.2 2.0kb downstream 2.0kb downstream 15038 true SL2.50ch08: 24445989-24461026 Solanum lycopersicum
Solyc08g041980.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 24445989-24447988 Solanum lycopersicum
Solyc08g041980.2 5.0kb upstream 5.0kb upstream 18038 true SL2.50ch08: 24447989-24466026 Solanum lycopersicum
Solyc08g041980.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 24461027-24466026 Solanum lycopersicum
Solyc08g041980.2 5.0kb downstream 5.0kb downstream 18038 true SL2.50ch08: 24442989-24461026 Solanum lycopersicum
Solyc08g041980.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 24442989-24447988 Solanum lycopersicum
Solyc08g041980.2 10.0kb upstream 10.0kb upstream 23038 true SL2.50ch08: 24447989-24471026 Solanum lycopersicum
Solyc08g041980.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 24461027-24471026 Solanum lycopersicum
Solyc08g041980.2 10.0kb downstream 10.0kb downstream 23038 true SL2.50ch08: 24437989-24461026 Solanum lycopersicum
Solyc08g041980.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 24437989-24447988 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476129 5263 Asterids View MSA
123750181 5271 Pentapetalae View MSA
122793611 5272 Eudicot View MSA
122047015 5273 Angiosperm View MSA
121345754 5274 Embryophyte View MSA
123424414 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain