Gene : Solyc08g028890.1 S. lycopersicum ITAG2.4
Defline:  (1 of 6) PTHR12534 - 30S RIBOSOMAL PROTEIN S2 PROKARYOTIC AND ORGANELLAR Description:  30S ribosomal protein S2 chloroplastic (AHRD V1 ***- D3WD39_XIMAM); contains Interpro domain(s) IPR005706 Ribosomal protein S2, bacterial-type
Genomic Order:  900 Name:  ? Solyc08g028890.1
Secondary Identifier:  ? PAC:36149337
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g028890.1 0.5kb upstream 0.5kb upstream 686 true SL2.50ch08: 39150521-39151206 Solanum lycopersicum
Solyc08g028890.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 39150521-39151020 Solanum lycopersicum
Solyc08g028890.1 0.5kb downstream 0.5kb downstream 686 true SL2.50ch08: 39151021-39151706 Solanum lycopersicum
Solyc08g028890.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 39151207-39151706 Solanum lycopersicum
Solyc08g028890.1 1.0kb upstream 1.0kb upstream 1186 true SL2.50ch08: 39150021-39151206 Solanum lycopersicum
Solyc08g028890.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 39150021-39151020 Solanum lycopersicum
Solyc08g028890.1 1.0kb downstream 1.0kb downstream 1186 true SL2.50ch08: 39151021-39152206 Solanum lycopersicum
Solyc08g028890.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 39151207-39152206 Solanum lycopersicum
Solyc08g028890.1 2.0kb upstream 2.0kb upstream 2186 true SL2.50ch08: 39149021-39151206 Solanum lycopersicum
Solyc08g028890.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 39149021-39151020 Solanum lycopersicum
Solyc08g028890.1 2.0kb downstream 2.0kb downstream 2186 true SL2.50ch08: 39151021-39153206 Solanum lycopersicum
Solyc08g028890.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 39151207-39153206 Solanum lycopersicum
Solyc08g028890.1 5.0kb upstream 5.0kb upstream 5186 true SL2.50ch08: 39146021-39151206 Solanum lycopersicum
Solyc08g028890.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 39146021-39151020 Solanum lycopersicum
Solyc08g028890.1 5.0kb downstream 5.0kb downstream 5186 true SL2.50ch08: 39151021-39156206 Solanum lycopersicum
Solyc08g028890.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 39151207-39156206 Solanum lycopersicum
Solyc08g028890.1 10.0kb upstream 10.0kb upstream 10186 true SL2.50ch08: 39141021-39151206 Solanum lycopersicum
Solyc08g028890.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 39141021-39151020 Solanum lycopersicum
Solyc08g028890.1 10.0kb downstream 10.0kb downstream 10186 true SL2.50ch08: 39151021-39161206 Solanum lycopersicum
Solyc08g028890.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 39151207-39161206 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482822 5263 Asterids View MSA
123752530 5271 Pentapetalae View MSA
122774618 5272 Eudicot View MSA
122050260 5273 Angiosperm View MSA
121348361 5274 Embryophyte View MSA
123428637 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain