Gene : Solyc08g028780.1 S. lycopersicum ITAG2.4
Defline:  (1 of 11) PF05910 - Plant protein of unknown function (DUF868) (DUF868) Description:  AT5G28150-like protein (Fragment) (AHRD V1 *-*- D6PS16_9BRAS); contains Interpro domain(s) IPR008586 Protein of unknown function DUF868, plant
Genomic Order:  911 Name:  ? Solyc08g028780.1
Secondary Identifier:  ? PAC:36149788
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g028780.1 0.5kb upstream 0.5kb upstream 1520 true SL2.50ch08: 40027113-40028632 Solanum lycopersicum
Solyc08g028780.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 40028133-40028632 Solanum lycopersicum
Solyc08g028780.1 0.5kb downstream 0.5kb downstream 1520 true SL2.50ch08: 40026613-40028132 Solanum lycopersicum
Solyc08g028780.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 40026613-40027112 Solanum lycopersicum
Solyc08g028780.1 1.0kb upstream 1.0kb upstream 2020 true SL2.50ch08: 40027113-40029132 Solanum lycopersicum
Solyc08g028780.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 40028133-40029132 Solanum lycopersicum
Solyc08g028780.1 1.0kb downstream 1.0kb downstream 2020 true SL2.50ch08: 40026113-40028132 Solanum lycopersicum
Solyc08g028780.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 40026113-40027112 Solanum lycopersicum
Solyc08g028780.1 2.0kb upstream 2.0kb upstream 3020 true SL2.50ch08: 40027113-40030132 Solanum lycopersicum
Solyc08g028780.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 40028133-40030132 Solanum lycopersicum
Solyc08g028780.1 2.0kb downstream 2.0kb downstream 3020 true SL2.50ch08: 40025113-40028132 Solanum lycopersicum
Solyc08g028780.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 40025113-40027112 Solanum lycopersicum
Solyc08g028780.1 5.0kb upstream 5.0kb upstream 6020 true SL2.50ch08: 40027113-40033132 Solanum lycopersicum
Solyc08g028780.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 40028133-40033132 Solanum lycopersicum
Solyc08g028780.1 5.0kb downstream 5.0kb downstream 6020 true SL2.50ch08: 40022113-40028132 Solanum lycopersicum
Solyc08g028780.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 40022113-40027112 Solanum lycopersicum
Solyc08g028780.1 10.0kb upstream 10.0kb upstream 11020 true SL2.50ch08: 40027113-40038132 Solanum lycopersicum
Solyc08g028780.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 40028133-40038132 Solanum lycopersicum
Solyc08g028780.1 10.0kb downstream 10.0kb downstream 11020 true SL2.50ch08: 40017113-40028132 Solanum lycopersicum
Solyc08g028780.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 40017113-40027112 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040994 5273 Angiosperm View MSA
121478863 5263 Asterids View MSA
123743333 5271 Pentapetalae View MSA
122793790 5272 Eudicot View MSA
121309781 5274 Embryophyte View MSA
123347442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain