Gene : Solyc08g061100.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13301:SF33 - CELLULOSE SYNTHASE A CATALYTIC SUBUNIT 1 [UDP-FORMING] Description:  Cellulose synthase (AHRD V1 **** B9IKV7_POPTR); contains Interpro domain(s) IPR005150 Cellulose synthase
Genomic Order:  964 Name:  ? Solyc08g061100.2
Secondary Identifier:  ? PAC:36149243
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-1001 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g061100.2 0.5kb upstream 0.5kb upstream 8974 true SL2.50ch08: 46658543-46667516 Solanum lycopersicum
Solyc08g061100.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 46667017-46667516 Solanum lycopersicum
Solyc08g061100.2 0.5kb downstream 0.5kb downstream 8974 true SL2.50ch08: 46658043-46667016 Solanum lycopersicum
Solyc08g061100.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 46658043-46658542 Solanum lycopersicum
Solyc08g061100.2 1.0kb upstream 1.0kb upstream 9474 true SL2.50ch08: 46658543-46668016 Solanum lycopersicum
Solyc08g061100.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 46667017-46668016 Solanum lycopersicum
Solyc08g061100.2 1.0kb downstream 1.0kb downstream 9474 true SL2.50ch08: 46657543-46667016 Solanum lycopersicum
Solyc08g061100.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 46657543-46658542 Solanum lycopersicum
Solyc08g061100.2 2.0kb upstream 2.0kb upstream 10474 true SL2.50ch08: 46658543-46669016 Solanum lycopersicum
Solyc08g061100.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 46667017-46669016 Solanum lycopersicum
Solyc08g061100.2 2.0kb downstream 2.0kb downstream 10474 true SL2.50ch08: 46656543-46667016 Solanum lycopersicum
Solyc08g061100.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 46656543-46658542 Solanum lycopersicum
Solyc08g061100.2 5.0kb upstream 5.0kb upstream 13474 true SL2.50ch08: 46658543-46672016 Solanum lycopersicum
Solyc08g061100.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 46667017-46672016 Solanum lycopersicum
Solyc08g061100.2 5.0kb downstream 5.0kb downstream 13474 true SL2.50ch08: 46653543-46667016 Solanum lycopersicum
Solyc08g061100.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 46653543-46658542 Solanum lycopersicum
Solyc08g061100.2 10.0kb upstream 10.0kb upstream 18474 true SL2.50ch08: 46658543-46677016 Solanum lycopersicum
Solyc08g061100.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 46667017-46677016 Solanum lycopersicum
Solyc08g061100.2 10.0kb downstream 10.0kb downstream 18474 true SL2.50ch08: 46648543-46667016 Solanum lycopersicum
Solyc08g061100.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 46648543-46658542 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468311 5263 Asterids View MSA
123746424 5271 Pentapetalae View MSA
122793475 5272 Eudicot View MSA
122046929 5273 Angiosperm View MSA
121351501 5274 Embryophyte View MSA
123382193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain