Gene : Solyc08g008040.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K14773 - U3 small nucleolar RNA-associated protein 23 (UTP23) Description:  rRNA-processing protein UTP23 homolog (AHRD V1 *--- D3PH70_9MAXI); contains Interpro domain(s) IPR006984 Protein of unknown function DUF652
Genomic Order:  300 Name:  ? Solyc08g008040.2
Secondary Identifier:  ? PAC:36151300
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g008040.2 0.5kb upstream 0.5kb upstream 4631 true SL2.50ch08: 2533641-2538271 Solanum lycopersicum
Solyc08g008040.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 2533641-2534140 Solanum lycopersicum
Solyc08g008040.2 0.5kb downstream 0.5kb downstream 4631 true SL2.50ch08: 2534141-2538771 Solanum lycopersicum
Solyc08g008040.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 2538272-2538771 Solanum lycopersicum
Solyc08g008040.2 1.0kb upstream 1.0kb upstream 5131 true SL2.50ch08: 2533141-2538271 Solanum lycopersicum
Solyc08g008040.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 2533141-2534140 Solanum lycopersicum
Solyc08g008040.2 1.0kb downstream 1.0kb downstream 5131 true SL2.50ch08: 2534141-2539271 Solanum lycopersicum
Solyc08g008040.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 2538272-2539271 Solanum lycopersicum
Solyc08g008040.2 2.0kb upstream 2.0kb upstream 6131 true SL2.50ch08: 2532141-2538271 Solanum lycopersicum
Solyc08g008040.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 2532141-2534140 Solanum lycopersicum
Solyc08g008040.2 2.0kb downstream 2.0kb downstream 6131 true SL2.50ch08: 2534141-2540271 Solanum lycopersicum
Solyc08g008040.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 2538272-2540271 Solanum lycopersicum
Solyc08g008040.2 5.0kb upstream 5.0kb upstream 9131 true SL2.50ch08: 2529141-2538271 Solanum lycopersicum
Solyc08g008040.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 2529141-2534140 Solanum lycopersicum
Solyc08g008040.2 5.0kb downstream 5.0kb downstream 9131 true SL2.50ch08: 2534141-2543271 Solanum lycopersicum
Solyc08g008040.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 2538272-2543271 Solanum lycopersicum
Solyc08g008040.2 10.0kb upstream 10.0kb upstream 14131 true SL2.50ch08: 2524141-2538271 Solanum lycopersicum
Solyc08g008040.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 2524141-2534140 Solanum lycopersicum
Solyc08g008040.2 10.0kb downstream 10.0kb downstream 14131 true SL2.50ch08: 2534141-2548271 Solanum lycopersicum
Solyc08g008040.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 2538272-2548271 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466346 5263 Asterids View MSA
123738427 5271 Pentapetalae View MSA
122793341 5272 Eudicot View MSA
122042240 5273 Angiosperm View MSA
121350234 5274 Embryophyte View MSA
123426184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain