Gene : Solyc08g007030.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13527:SF0 - SAYSVFN DOMAIN-CONTAINING PROTEIN 1 Description:  Ubiquitin family protein (AHRD V1 ***- D7LHV6_ARALY); contains Interpro domain(s) IPR019387 Domain of unknown function SAYSvFN
Genomic Order:  201 Name:  ? Solyc08g007030.2
Secondary Identifier:  ? PAC:36150899
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g007030.2 0.5kb upstream 0.5kb upstream 6010 true SL2.50ch08: 1596900-1602909 Solanum lycopersicum
Solyc08g007030.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 1602410-1602909 Solanum lycopersicum
Solyc08g007030.2 0.5kb downstream 0.5kb downstream 6010 true SL2.50ch08: 1596400-1602409 Solanum lycopersicum
Solyc08g007030.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 1596400-1596899 Solanum lycopersicum
Solyc08g007030.2 1.0kb upstream 1.0kb upstream 6510 true SL2.50ch08: 1596900-1603409 Solanum lycopersicum
Solyc08g007030.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 1602410-1603409 Solanum lycopersicum
Solyc08g007030.2 1.0kb downstream 1.0kb downstream 6510 true SL2.50ch08: 1595900-1602409 Solanum lycopersicum
Solyc08g007030.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 1595900-1596899 Solanum lycopersicum
Solyc08g007030.2 2.0kb upstream 2.0kb upstream 7510 true SL2.50ch08: 1596900-1604409 Solanum lycopersicum
Solyc08g007030.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 1602410-1604409 Solanum lycopersicum
Solyc08g007030.2 2.0kb downstream 2.0kb downstream 7510 true SL2.50ch08: 1594900-1602409 Solanum lycopersicum
Solyc08g007030.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 1594900-1596899 Solanum lycopersicum
Solyc08g007030.2 5.0kb upstream 5.0kb upstream 10510 true SL2.50ch08: 1596900-1607409 Solanum lycopersicum
Solyc08g007030.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 1602410-1607409 Solanum lycopersicum
Solyc08g007030.2 5.0kb downstream 5.0kb downstream 10510 true SL2.50ch08: 1591900-1602409 Solanum lycopersicum
Solyc08g007030.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 1591900-1596899 Solanum lycopersicum
Solyc08g007030.2 10.0kb upstream 10.0kb upstream 15510 true SL2.50ch08: 1596900-1612409 Solanum lycopersicum
Solyc08g007030.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 1602410-1612409 Solanum lycopersicum
Solyc08g007030.2 10.0kb downstream 10.0kb downstream 15510 true SL2.50ch08: 1586900-1602409 Solanum lycopersicum
Solyc08g007030.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 1586900-1596899 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470542 5263 Asterids View MSA
123749839 5271 Pentapetalae View MSA
122786941 5272 Eudicot View MSA
122045022 5273 Angiosperm View MSA
121347304 5274 Embryophyte View MSA
123428664 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain