Gene : Solyc08g007520.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K12589 - exosome complex component RRP42 (RRP42, EXOSC7) Description:  Exosome complex exonuclease RRP42 (AHRD V1 ***- B6T4R9_MAIZE); contains Interpro domain(s) IPR003377 Cornichon
Genomic Order:  250 Name:  ? Solyc08g007520.2
Secondary Identifier:  ? PAC:36149902
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g007520.2 0.5kb upstream 0.5kb upstream 3351 true SL2.50ch08: 2066461-2069811 Solanum lycopersicum
Solyc08g007520.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 2069312-2069811 Solanum lycopersicum
Solyc08g007520.2 0.5kb downstream 0.5kb downstream 3351 true SL2.50ch08: 2065961-2069311 Solanum lycopersicum
Solyc08g007520.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 2065961-2066460 Solanum lycopersicum
Solyc08g007520.2 1.0kb upstream 1.0kb upstream 3851 true SL2.50ch08: 2066461-2070311 Solanum lycopersicum
Solyc08g007520.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 2069312-2070311 Solanum lycopersicum
Solyc08g007520.2 1.0kb downstream 1.0kb downstream 3851 true SL2.50ch08: 2065461-2069311 Solanum lycopersicum
Solyc08g007520.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 2065461-2066460 Solanum lycopersicum
Solyc08g007520.2 2.0kb upstream 2.0kb upstream 4851 true SL2.50ch08: 2066461-2071311 Solanum lycopersicum
Solyc08g007520.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 2069312-2071311 Solanum lycopersicum
Solyc08g007520.2 2.0kb downstream 2.0kb downstream 4851 true SL2.50ch08: 2064461-2069311 Solanum lycopersicum
Solyc08g007520.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 2064461-2066460 Solanum lycopersicum
Solyc08g007520.2 5.0kb upstream 5.0kb upstream 7851 true SL2.50ch08: 2066461-2074311 Solanum lycopersicum
Solyc08g007520.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 2069312-2074311 Solanum lycopersicum
Solyc08g007520.2 5.0kb downstream 5.0kb downstream 7851 true SL2.50ch08: 2061461-2069311 Solanum lycopersicum
Solyc08g007520.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 2061461-2066460 Solanum lycopersicum
Solyc08g007520.2 10.0kb upstream 10.0kb upstream 12851 true SL2.50ch08: 2066461-2079311 Solanum lycopersicum
Solyc08g007520.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 2069312-2079311 Solanum lycopersicum
Solyc08g007520.2 10.0kb downstream 10.0kb downstream 12851 true SL2.50ch08: 2056461-2069311 Solanum lycopersicum
Solyc08g007520.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 2056461-2066460 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472935 5263 Asterids View MSA
123739797 5271 Pentapetalae View MSA
122793133 5272 Eudicot View MSA
122044791 5273 Angiosperm View MSA
121345379 5274 Embryophyte View MSA
123428075 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain