Gene : Solyc08g007440.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K18163 - NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 6 (NDUFAF6) Description:  Phytoene synthase (AHRD V1 ***- B6TWB6_MAIZE); contains Interpro domain(s) IPR002060 Squalene/phytoene synthase
Genomic Order:  242 Name:  ? Solyc08g007440.1
Secondary Identifier:  ? PAC:36149399
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g007440.1 0.5kb upstream 0.5kb upstream 1412 true SL2.50ch08: 2005498-2006909 Solanum lycopersicum
Solyc08g007440.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 2006410-2006909 Solanum lycopersicum
Solyc08g007440.1 0.5kb downstream 0.5kb downstream 1412 true SL2.50ch08: 2004998-2006409 Solanum lycopersicum
Solyc08g007440.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 2004998-2005497 Solanum lycopersicum
Solyc08g007440.1 1.0kb upstream 1.0kb upstream 1912 true SL2.50ch08: 2005498-2007409 Solanum lycopersicum
Solyc08g007440.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 2006410-2007409 Solanum lycopersicum
Solyc08g007440.1 1.0kb downstream 1.0kb downstream 1912 true SL2.50ch08: 2004498-2006409 Solanum lycopersicum
Solyc08g007440.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 2004498-2005497 Solanum lycopersicum
Solyc08g007440.1 2.0kb upstream 2.0kb upstream 2912 true SL2.50ch08: 2005498-2008409 Solanum lycopersicum
Solyc08g007440.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 2006410-2008409 Solanum lycopersicum
Solyc08g007440.1 2.0kb downstream 2.0kb downstream 2912 true SL2.50ch08: 2003498-2006409 Solanum lycopersicum
Solyc08g007440.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 2003498-2005497 Solanum lycopersicum
Solyc08g007440.1 5.0kb upstream 5.0kb upstream 5912 true SL2.50ch08: 2005498-2011409 Solanum lycopersicum
Solyc08g007440.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 2006410-2011409 Solanum lycopersicum
Solyc08g007440.1 5.0kb downstream 5.0kb downstream 5912 true SL2.50ch08: 2000498-2006409 Solanum lycopersicum
Solyc08g007440.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 2000498-2005497 Solanum lycopersicum
Solyc08g007440.1 10.0kb upstream 10.0kb upstream 10912 true SL2.50ch08: 2005498-2016409 Solanum lycopersicum
Solyc08g007440.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 2006410-2016409 Solanum lycopersicum
Solyc08g007440.1 10.0kb downstream 10.0kb downstream 10912 true SL2.50ch08: 1995498-2006409 Solanum lycopersicum
Solyc08g007440.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 1995498-2005497 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121472451 5263 Asterids View MSA
123739547 5271 Pentapetalae View MSA
122788763 5272 Eudicot View MSA
122043915 5273 Angiosperm View MSA
121344708 5274 Embryophyte View MSA
123424120 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain