Gene : Solyc08g007330.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K08740 - DNA mismatch repair protein MSH4 (MSH4) Description:  DNA mismatch repair protein mutS (AHRD V1 ***- B2W010_PYRTR); contains Interpro domain(s) IPR000432 DNA mismatch repair protein MutS, C-terminal
Genomic Order:  231 Name:  ? Solyc08g007330.2
Secondary Identifier:  ? PAC:36149606
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g007330.2 0.5kb upstream 0.5kb upstream 14057 true SL2.50ch08: 1892968-1907024 Solanum lycopersicum
Solyc08g007330.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 1906525-1907024 Solanum lycopersicum
Solyc08g007330.2 0.5kb downstream 0.5kb downstream 14057 true SL2.50ch08: 1892468-1906524 Solanum lycopersicum
Solyc08g007330.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 1892468-1892967 Solanum lycopersicum
Solyc08g007330.2 1.0kb upstream 1.0kb upstream 14557 true SL2.50ch08: 1892968-1907524 Solanum lycopersicum
Solyc08g007330.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 1906525-1907524 Solanum lycopersicum
Solyc08g007330.2 1.0kb downstream 1.0kb downstream 14557 true SL2.50ch08: 1891968-1906524 Solanum lycopersicum
Solyc08g007330.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 1891968-1892967 Solanum lycopersicum
Solyc08g007330.2 2.0kb upstream 2.0kb upstream 15557 true SL2.50ch08: 1892968-1908524 Solanum lycopersicum
Solyc08g007330.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 1906525-1908524 Solanum lycopersicum
Solyc08g007330.2 2.0kb downstream 2.0kb downstream 15557 true SL2.50ch08: 1890968-1906524 Solanum lycopersicum
Solyc08g007330.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 1890968-1892967 Solanum lycopersicum
Solyc08g007330.2 5.0kb upstream 5.0kb upstream 18557 true SL2.50ch08: 1892968-1911524 Solanum lycopersicum
Solyc08g007330.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 1906525-1911524 Solanum lycopersicum
Solyc08g007330.2 5.0kb downstream 5.0kb downstream 18557 true SL2.50ch08: 1887968-1906524 Solanum lycopersicum
Solyc08g007330.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 1887968-1892967 Solanum lycopersicum
Solyc08g007330.2 10.0kb upstream 10.0kb upstream 23557 true SL2.50ch08: 1892968-1916524 Solanum lycopersicum
Solyc08g007330.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 1906525-1916524 Solanum lycopersicum
Solyc08g007330.2 10.0kb downstream 10.0kb downstream 23557 true SL2.50ch08: 1882968-1906524 Solanum lycopersicum
Solyc08g007330.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 1882968-1892967 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467527 5263 Asterids View MSA
123737053 5271 Pentapetalae View MSA
122788713 5272 Eudicot View MSA
122042795 5273 Angiosperm View MSA
121346371 5274 Embryophyte View MSA
123424062 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain