Gene : Solyc08g016170.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) 2.3.1.41 - Beta-ketoacyl-[acyl-carrier-protein] synthase I / KAS I Description:  3-oxoacyl-(Acyl carrier protein) synthase II (AHRD V1 **** D6YNQ6_CHLT1); contains Interpro domain(s) IPR017568 3-oxoacyl-[acyl-carrier-protein] synthase 2
Genomic Order:  503 Name:  ? Solyc08g016170.2
Secondary Identifier:  ? PAC:36149720
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum FASYN-ELONG-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-5156 Solanum lycopersicum pathologic  
Slycopersicum PWY-5971 Solanum lycopersicum pathologic  
Slycopersicum PWY-5989 Solanum lycopersicum pathologic  
Slycopersicum PWY-6282 Solanum lycopersicum pathologic  
Slycopersicum PWY-7388 Solanum lycopersicum pathologic  
Slycopersicum PWY-7663 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g016170.2 0.5kb upstream 0.5kb upstream 11584 true SL2.50ch08: 6985793-6997376 Solanum lycopersicum
Solyc08g016170.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 6985793-6986292 Solanum lycopersicum
Solyc08g016170.2 0.5kb downstream 0.5kb downstream 11584 true SL2.50ch08: 6986293-6997876 Solanum lycopersicum
Solyc08g016170.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 6997377-6997876 Solanum lycopersicum
Solyc08g016170.2 1.0kb upstream 1.0kb upstream 12084 true SL2.50ch08: 6985293-6997376 Solanum lycopersicum
Solyc08g016170.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 6985293-6986292 Solanum lycopersicum
Solyc08g016170.2 1.0kb downstream 1.0kb downstream 12084 true SL2.50ch08: 6986293-6998376 Solanum lycopersicum
Solyc08g016170.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 6997377-6998376 Solanum lycopersicum
Solyc08g016170.2 2.0kb upstream 2.0kb upstream 13084 true SL2.50ch08: 6984293-6997376 Solanum lycopersicum
Solyc08g016170.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 6984293-6986292 Solanum lycopersicum
Solyc08g016170.2 2.0kb downstream 2.0kb downstream 13084 true SL2.50ch08: 6986293-6999376 Solanum lycopersicum
Solyc08g016170.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 6997377-6999376 Solanum lycopersicum
Solyc08g016170.2 5.0kb upstream 5.0kb upstream 16084 true SL2.50ch08: 6981293-6997376 Solanum lycopersicum
Solyc08g016170.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 6981293-6986292 Solanum lycopersicum
Solyc08g016170.2 5.0kb downstream 5.0kb downstream 16084 true SL2.50ch08: 6986293-7002376 Solanum lycopersicum
Solyc08g016170.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 6997377-7002376 Solanum lycopersicum
Solyc08g016170.2 10.0kb upstream 10.0kb upstream 21084 true SL2.50ch08: 6976293-6997376 Solanum lycopersicum
Solyc08g016170.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 6976293-6986292 Solanum lycopersicum
Solyc08g016170.2 10.0kb downstream 10.0kb downstream 21084 true SL2.50ch08: 6986293-7007376 Solanum lycopersicum
Solyc08g016170.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 6997377-7007376 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479395 5263 Asterids View MSA
123747178 5271 Pentapetalae View MSA
122792015 5272 Eudicot View MSA
122044089 5273 Angiosperm View MSA
121347391 5274 Embryophyte View MSA
123426303 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain