Gene : Solyc08g008530.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 4.1.2.53 - 2-keto-3-deoxy-L-rhamnonate aldolase / KDR aldolase Description:  Aldolase (AHRD V1 ***- D7JQJ4_ECOLX); contains Interpro domain(s) IPR005000 HpcH/HpaI aldolase
Genomic Order:  348 Name:  ? Solyc08g008530.1
Secondary Identifier:  ? PAC:36151414
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g008530.1 0.5kb upstream 0.5kb upstream 1556 true SL2.50ch08: 2926171-2927726 Solanum lycopersicum
Solyc08g008530.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 2927227-2927726 Solanum lycopersicum
Solyc08g008530.1 0.5kb downstream 0.5kb downstream 1556 true SL2.50ch08: 2925671-2927226 Solanum lycopersicum
Solyc08g008530.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 2925671-2926170 Solanum lycopersicum
Solyc08g008530.1 1.0kb upstream 1.0kb upstream 2056 true SL2.50ch08: 2926171-2928226 Solanum lycopersicum
Solyc08g008530.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 2927227-2928226 Solanum lycopersicum
Solyc08g008530.1 1.0kb downstream 1.0kb downstream 2056 true SL2.50ch08: 2925171-2927226 Solanum lycopersicum
Solyc08g008530.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 2925171-2926170 Solanum lycopersicum
Solyc08g008530.1 2.0kb upstream 2.0kb upstream 3056 true SL2.50ch08: 2926171-2929226 Solanum lycopersicum
Solyc08g008530.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 2927227-2929226 Solanum lycopersicum
Solyc08g008530.1 2.0kb downstream 2.0kb downstream 3056 true SL2.50ch08: 2924171-2927226 Solanum lycopersicum
Solyc08g008530.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 2924171-2926170 Solanum lycopersicum
Solyc08g008530.1 5.0kb upstream 5.0kb upstream 6056 true SL2.50ch08: 2926171-2932226 Solanum lycopersicum
Solyc08g008530.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 2927227-2932226 Solanum lycopersicum
Solyc08g008530.1 5.0kb downstream 5.0kb downstream 6056 true SL2.50ch08: 2921171-2927226 Solanum lycopersicum
Solyc08g008530.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 2921171-2926170 Solanum lycopersicum
Solyc08g008530.1 10.0kb upstream 10.0kb upstream 11056 true SL2.50ch08: 2926171-2937226 Solanum lycopersicum
Solyc08g008530.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 2927227-2937226 Solanum lycopersicum
Solyc08g008530.1 10.0kb downstream 10.0kb downstream 11056 true SL2.50ch08: 2916171-2927226 Solanum lycopersicum
Solyc08g008530.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 2916171-2926170 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121474431 5263 Asterids View MSA
123741108 5271 Pentapetalae View MSA
122791173 5272 Eudicot View MSA
122045726 5273 Angiosperm View MSA
121345930 5274 Embryophyte View MSA
123426145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain