Gene : Solyc08g014310.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 2.1.1.53 - Putrescine N-methyltransferase Description:  Spermidine synthase (AHRD V1 **** A7DY57_COCOF); contains Interpro domain(s) IPR001045 Spermine synthase
Genomic Order:  426 Name:  ? Solyc08g014310.2
Secondary Identifier:  ? PAC:36150230
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-5315 Solanum lycopersicum pathologic  
Slycopersicum PWY-7341 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g014310.2 0.5kb upstream 0.5kb upstream 4198 true SL2.50ch08: 4125209-4129406 Solanum lycopersicum
Solyc08g014310.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 4125209-4125708 Solanum lycopersicum
Solyc08g014310.2 0.5kb downstream 0.5kb downstream 4198 true SL2.50ch08: 4125709-4129906 Solanum lycopersicum
Solyc08g014310.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 4129407-4129906 Solanum lycopersicum
Solyc08g014310.2 1.0kb upstream 1.0kb upstream 4698 true SL2.50ch08: 4124709-4129406 Solanum lycopersicum
Solyc08g014310.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 4124709-4125708 Solanum lycopersicum
Solyc08g014310.2 1.0kb downstream 1.0kb downstream 4698 true SL2.50ch08: 4125709-4130406 Solanum lycopersicum
Solyc08g014310.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 4129407-4130406 Solanum lycopersicum
Solyc08g014310.2 2.0kb upstream 2.0kb upstream 5698 true SL2.50ch08: 4123709-4129406 Solanum lycopersicum
Solyc08g014310.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 4123709-4125708 Solanum lycopersicum
Solyc08g014310.2 2.0kb downstream 2.0kb downstream 5698 true SL2.50ch08: 4125709-4131406 Solanum lycopersicum
Solyc08g014310.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 4129407-4131406 Solanum lycopersicum
Solyc08g014310.2 5.0kb upstream 5.0kb upstream 8698 true SL2.50ch08: 4120709-4129406 Solanum lycopersicum
Solyc08g014310.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 4120709-4125708 Solanum lycopersicum
Solyc08g014310.2 5.0kb downstream 5.0kb downstream 8698 true SL2.50ch08: 4125709-4134406 Solanum lycopersicum
Solyc08g014310.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 4129407-4134406 Solanum lycopersicum
Solyc08g014310.2 10.0kb upstream 10.0kb upstream 13698 true SL2.50ch08: 4115709-4129406 Solanum lycopersicum
Solyc08g014310.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 4115709-4125708 Solanum lycopersicum
Solyc08g014310.2 10.0kb downstream 10.0kb downstream 13698 true SL2.50ch08: 4125709-4139406 Solanum lycopersicum
Solyc08g014310.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 4129407-4139406 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121710945 5273 Angiosperm View MSA
121385459 5263 Asterids View MSA
123667352 5271 Pentapetalae View MSA
122701263 5272 Eudicot View MSA
120982715 5274 Embryophyte View MSA
123022965 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain