Gene : Solyc07g008540.2 S. lycopersicum ITAG2.4
Defline:  (1 of 30) PF06203 - CCT motif (CCT) Description:  CONSTANS-like zinc finger protein (AHRD V1 *-*- D0EP06_SOYBN); contains Interpro domain(s) IPR010402 CCT domain
Genomic Order:  355 Name:  ? Solyc07g008540.2
Secondary Identifier:  ? PAC:36162229
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g008540.2 0.5kb upstream 0.5kb upstream 4314 true SL2.50ch07: 3466133-3470446 Solanum lycopersicum
Solyc07g008540.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 3469947-3470446 Solanum lycopersicum
Solyc07g008540.2 0.5kb downstream 0.5kb downstream 4314 true SL2.50ch07: 3465633-3469946 Solanum lycopersicum
Solyc07g008540.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 3465633-3466132 Solanum lycopersicum
Solyc07g008540.2 1.0kb upstream 1.0kb upstream 4814 true SL2.50ch07: 3466133-3470946 Solanum lycopersicum
Solyc07g008540.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 3469947-3470946 Solanum lycopersicum
Solyc07g008540.2 1.0kb downstream 1.0kb downstream 4814 true SL2.50ch07: 3465133-3469946 Solanum lycopersicum
Solyc07g008540.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 3465133-3466132 Solanum lycopersicum
Solyc07g008540.2 2.0kb upstream 2.0kb upstream 5814 true SL2.50ch07: 3466133-3471946 Solanum lycopersicum
Solyc07g008540.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 3469947-3471946 Solanum lycopersicum
Solyc07g008540.2 2.0kb downstream 2.0kb downstream 5814 true SL2.50ch07: 3464133-3469946 Solanum lycopersicum
Solyc07g008540.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 3464133-3466132 Solanum lycopersicum
Solyc07g008540.2 5.0kb upstream 5.0kb upstream 8814 true SL2.50ch07: 3466133-3474946 Solanum lycopersicum
Solyc07g008540.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 3469947-3474946 Solanum lycopersicum
Solyc07g008540.2 5.0kb downstream 5.0kb downstream 8814 true SL2.50ch07: 3461133-3469946 Solanum lycopersicum
Solyc07g008540.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 3461133-3466132 Solanum lycopersicum
Solyc07g008540.2 10.0kb upstream 10.0kb upstream 13814 true SL2.50ch07: 3466133-3479946 Solanum lycopersicum
Solyc07g008540.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 3469947-3479946 Solanum lycopersicum
Solyc07g008540.2 10.0kb downstream 10.0kb downstream 13814 true SL2.50ch07: 3456133-3469946 Solanum lycopersicum
Solyc07g008540.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 3456133-3466132 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121477047 5263 Asterids View MSA
123741675 5271 Pentapetalae View MSA
122787863 5272 Eudicot View MSA
122044342 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121310281 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain