Gene : Solyc07g008530.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) 6.1.1.1 - Tyrosine--tRNA ligase / Tyrosyl-tRNA synthetase Description:  Tyrosyl-tRNA synthetase (AHRD V1 ***- A4RSR2_OSTLU); contains Interpro domain(s) IPR002307 Tyrosyl-tRNA synthetase, class Ib, bacterial/mitochondrial
Genomic Order:  354 Name:  ? Solyc07g008530.1
Secondary Identifier:  ? PAC:36161183
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum TRNA-CHARGING-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g008530.1 0.5kb upstream 0.5kb upstream 2066 true SL2.50ch07: 3458054-3460119 Solanum lycopersicum
Solyc07g008530.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 3458054-3458553 Solanum lycopersicum
Solyc07g008530.1 0.5kb downstream 0.5kb downstream 2066 true SL2.50ch07: 3458554-3460619 Solanum lycopersicum
Solyc07g008530.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 3460120-3460619 Solanum lycopersicum
Solyc07g008530.1 1.0kb upstream 1.0kb upstream 2566 true SL2.50ch07: 3457554-3460119 Solanum lycopersicum
Solyc07g008530.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 3457554-3458553 Solanum lycopersicum
Solyc07g008530.1 1.0kb downstream 1.0kb downstream 2566 true SL2.50ch07: 3458554-3461119 Solanum lycopersicum
Solyc07g008530.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 3460120-3461119 Solanum lycopersicum
Solyc07g008530.1 2.0kb upstream 2.0kb upstream 3566 true SL2.50ch07: 3456554-3460119 Solanum lycopersicum
Solyc07g008530.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 3456554-3458553 Solanum lycopersicum
Solyc07g008530.1 2.0kb downstream 2.0kb downstream 3566 true SL2.50ch07: 3458554-3462119 Solanum lycopersicum
Solyc07g008530.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 3460120-3462119 Solanum lycopersicum
Solyc07g008530.1 5.0kb upstream 5.0kb upstream 6566 true SL2.50ch07: 3453554-3460119 Solanum lycopersicum
Solyc07g008530.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 3453554-3458553 Solanum lycopersicum
Solyc07g008530.1 5.0kb downstream 5.0kb downstream 6566 true SL2.50ch07: 3458554-3465119 Solanum lycopersicum
Solyc07g008530.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 3460120-3465119 Solanum lycopersicum
Solyc07g008530.1 10.0kb upstream 10.0kb upstream 11566 true SL2.50ch07: 3448554-3460119 Solanum lycopersicum
Solyc07g008530.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 3448554-3458553 Solanum lycopersicum
Solyc07g008530.1 10.0kb downstream 10.0kb downstream 11566 true SL2.50ch07: 3458554-3470119 Solanum lycopersicum
Solyc07g008530.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 3460120-3470119 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467216 5263 Asterids View MSA
123740976 5271 Pentapetalae View MSA
122788187 5272 Eudicot View MSA
122042111 5273 Angiosperm View MSA
121344516 5274 Embryophyte View MSA
123424944 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain