Gene : Solyc07g008850.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K02535 - UDP-3-O- (lpxC) Description:  UDP-3-O- (AHRD V1 ***- B9SJ32_RICCO); contains Interpro domain(s) IPR004463 UDP-3-O-acyl N-acetylglucosamine deacetylase
Genomic Order:  386 Name:  ? Solyc07g008850.2
Secondary Identifier:  ? PAC:36161888
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum NAGLIPASYN-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g008850.2 0.5kb upstream 0.5kb upstream 7351 true SL2.50ch07: 3825382-3832732 Solanum lycopersicum
Solyc07g008850.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 3832233-3832732 Solanum lycopersicum
Solyc07g008850.2 0.5kb downstream 0.5kb downstream 7351 true SL2.50ch07: 3824882-3832232 Solanum lycopersicum
Solyc07g008850.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 3824882-3825381 Solanum lycopersicum
Solyc07g008850.2 1.0kb upstream 1.0kb upstream 7851 true SL2.50ch07: 3825382-3833232 Solanum lycopersicum
Solyc07g008850.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 3832233-3833232 Solanum lycopersicum
Solyc07g008850.2 1.0kb downstream 1.0kb downstream 7851 true SL2.50ch07: 3824382-3832232 Solanum lycopersicum
Solyc07g008850.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 3824382-3825381 Solanum lycopersicum
Solyc07g008850.2 2.0kb upstream 2.0kb upstream 8851 true SL2.50ch07: 3825382-3834232 Solanum lycopersicum
Solyc07g008850.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 3832233-3834232 Solanum lycopersicum
Solyc07g008850.2 2.0kb downstream 2.0kb downstream 8851 true SL2.50ch07: 3823382-3832232 Solanum lycopersicum
Solyc07g008850.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 3823382-3825381 Solanum lycopersicum
Solyc07g008850.2 5.0kb upstream 5.0kb upstream 11851 true SL2.50ch07: 3825382-3837232 Solanum lycopersicum
Solyc07g008850.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 3832233-3837232 Solanum lycopersicum
Solyc07g008850.2 5.0kb downstream 5.0kb downstream 11851 true SL2.50ch07: 3820382-3832232 Solanum lycopersicum
Solyc07g008850.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 3820382-3825381 Solanum lycopersicum
Solyc07g008850.2 10.0kb upstream 10.0kb upstream 16851 true SL2.50ch07: 3825382-3842232 Solanum lycopersicum
Solyc07g008850.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 3832233-3842232 Solanum lycopersicum
Solyc07g008850.2 10.0kb downstream 10.0kb downstream 16851 true SL2.50ch07: 3815382-3832232 Solanum lycopersicum
Solyc07g008850.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 3815382-3825381 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471613 5263 Asterids View MSA
123739136 5271 Pentapetalae View MSA
122793269 5272 Eudicot View MSA
122046520 5273 Angiosperm View MSA
121346728 5274 Embryophyte View MSA
123424011 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain