Gene : Solyc07g018000.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K10777 - DNA ligase 4 (LIG4, DNL4) Description:  DNA ligase (AHRD V1 ***- B9IN68_POPTR); contains Interpro domain(s) IPR001357 BRCT
Genomic Order:  599 Name:  ? Solyc07g018000.2
Secondary Identifier:  ? PAC:36160504
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g018000.2 0.5kb upstream 0.5kb upstream 12114 true SL2.50ch07: 8778931-8791044 Solanum lycopersicum
Solyc07g018000.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 8778931-8779430 Solanum lycopersicum
Solyc07g018000.2 0.5kb downstream 0.5kb downstream 12114 true SL2.50ch07: 8779431-8791544 Solanum lycopersicum
Solyc07g018000.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 8791045-8791544 Solanum lycopersicum
Solyc07g018000.2 1.0kb upstream 1.0kb upstream 12614 true SL2.50ch07: 8778431-8791044 Solanum lycopersicum
Solyc07g018000.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 8778431-8779430 Solanum lycopersicum
Solyc07g018000.2 1.0kb downstream 1.0kb downstream 12614 true SL2.50ch07: 8779431-8792044 Solanum lycopersicum
Solyc07g018000.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 8791045-8792044 Solanum lycopersicum
Solyc07g018000.2 2.0kb upstream 2.0kb upstream 13614 true SL2.50ch07: 8777431-8791044 Solanum lycopersicum
Solyc07g018000.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 8777431-8779430 Solanum lycopersicum
Solyc07g018000.2 2.0kb downstream 2.0kb downstream 13614 true SL2.50ch07: 8779431-8793044 Solanum lycopersicum
Solyc07g018000.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 8791045-8793044 Solanum lycopersicum
Solyc07g018000.2 5.0kb upstream 5.0kb upstream 16614 true SL2.50ch07: 8774431-8791044 Solanum lycopersicum
Solyc07g018000.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 8774431-8779430 Solanum lycopersicum
Solyc07g018000.2 5.0kb downstream 5.0kb downstream 16614 true SL2.50ch07: 8779431-8796044 Solanum lycopersicum
Solyc07g018000.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 8791045-8796044 Solanum lycopersicum
Solyc07g018000.2 10.0kb upstream 10.0kb upstream 21614 true SL2.50ch07: 8769431-8791044 Solanum lycopersicum
Solyc07g018000.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 8769431-8779430 Solanum lycopersicum
Solyc07g018000.2 10.0kb downstream 10.0kb downstream 21614 true SL2.50ch07: 8779431-8801044 Solanum lycopersicum
Solyc07g018000.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 8791045-8801044 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121368803 5263 Asterids Singleton cluster - no MSA
123748643 5271 Pentapetalae View MSA
122787045 5272 Eudicot View MSA
122045949 5273 Angiosperm View MSA
121346093 5274 Embryophyte View MSA
123426430 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain