Gene : Solyc07g017950.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K01602 - ribulose-bisphosphate carboxylase small chain (rbcS) Description:  Ribulose bisphosphate carboxylase small chain (AHRD V1 ***- C6T529_SOYBN); contains Interpro domain(s) IPR000894 Ribulose bisphosphate carboxylase, small chain
Genomic Order:  594 Name:  ? Solyc07g017950.2
Secondary Identifier:  ? PAC:36161135
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum CALVIN-PWY Solanum lycopersicum pathologic  
Slycopersicum PHOTOALL-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-5723 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g017950.2 0.5kb upstream 0.5kb upstream 2509 true SL2.50ch07: 8636047-8638555 Solanum lycopersicum
Solyc07g017950.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 8636047-8636546 Solanum lycopersicum
Solyc07g017950.2 0.5kb downstream 0.5kb downstream 2509 true SL2.50ch07: 8636547-8639055 Solanum lycopersicum
Solyc07g017950.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 8638556-8639055 Solanum lycopersicum
Solyc07g017950.2 1.0kb upstream 1.0kb upstream 3009 true SL2.50ch07: 8635547-8638555 Solanum lycopersicum
Solyc07g017950.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 8635547-8636546 Solanum lycopersicum
Solyc07g017950.2 1.0kb downstream 1.0kb downstream 3009 true SL2.50ch07: 8636547-8639555 Solanum lycopersicum
Solyc07g017950.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 8638556-8639555 Solanum lycopersicum
Solyc07g017950.2 2.0kb upstream 2.0kb upstream 4009 true SL2.50ch07: 8634547-8638555 Solanum lycopersicum
Solyc07g017950.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 8634547-8636546 Solanum lycopersicum
Solyc07g017950.2 2.0kb downstream 2.0kb downstream 4009 true SL2.50ch07: 8636547-8640555 Solanum lycopersicum
Solyc07g017950.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 8638556-8640555 Solanum lycopersicum
Solyc07g017950.2 5.0kb upstream 5.0kb upstream 7009 true SL2.50ch07: 8631547-8638555 Solanum lycopersicum
Solyc07g017950.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 8631547-8636546 Solanum lycopersicum
Solyc07g017950.2 5.0kb downstream 5.0kb downstream 7009 true SL2.50ch07: 8636547-8643555 Solanum lycopersicum
Solyc07g017950.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 8638556-8643555 Solanum lycopersicum
Solyc07g017950.2 10.0kb upstream 10.0kb upstream 12009 true SL2.50ch07: 8626547-8638555 Solanum lycopersicum
Solyc07g017950.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 8626547-8636546 Solanum lycopersicum
Solyc07g017950.2 10.0kb downstream 10.0kb downstream 12009 true SL2.50ch07: 8636547-8648555 Solanum lycopersicum
Solyc07g017950.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 8638556-8648555 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476104 5263 Asterids View MSA
123742387 5271 Pentapetalae View MSA
122795056 5272 Eudicot View MSA
122048264 5273 Angiosperm View MSA
121348432 5274 Embryophyte View MSA
123426346 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain