Gene : Solyc07g016030.1 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PF01276//PF03711 - Orn/Lys/Arg decarboxylase, major domain (OKR_DC_1) // Orn/Lys/Arg decarboxylase, C-terminal domain (OKR_DC_1_C) Description:  Lysine decarboxylase (AHRD V1 **** Q8YMP6_ANASP); contains Interpro domain(s) IPR008286 Orn/Lys/Arg decarboxylase, C-terminal
Genomic Order:  503 Name:  ? Solyc07g016030.1
Secondary Identifier:  ? PAC:36160299
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum POLYAMINSYN3-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-43 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g016030.1 0.5kb upstream 0.5kb upstream 1548 true SL2.50ch07: 6182832-6184379 Solanum lycopersicum
Solyc07g016030.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 6182832-6183331 Solanum lycopersicum
Solyc07g016030.1 0.5kb downstream 0.5kb downstream 1548 true SL2.50ch07: 6183332-6184879 Solanum lycopersicum
Solyc07g016030.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 6184380-6184879 Solanum lycopersicum
Solyc07g016030.1 1.0kb upstream 1.0kb upstream 2048 true SL2.50ch07: 6182332-6184379 Solanum lycopersicum
Solyc07g016030.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 6182332-6183331 Solanum lycopersicum
Solyc07g016030.1 1.0kb downstream 1.0kb downstream 2048 true SL2.50ch07: 6183332-6185379 Solanum lycopersicum
Solyc07g016030.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 6184380-6185379 Solanum lycopersicum
Solyc07g016030.1 2.0kb upstream 2.0kb upstream 3048 true SL2.50ch07: 6181332-6184379 Solanum lycopersicum
Solyc07g016030.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 6181332-6183331 Solanum lycopersicum
Solyc07g016030.1 2.0kb downstream 2.0kb downstream 3048 true SL2.50ch07: 6183332-6186379 Solanum lycopersicum
Solyc07g016030.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 6184380-6186379 Solanum lycopersicum
Solyc07g016030.1 5.0kb upstream 5.0kb upstream 6048 true SL2.50ch07: 6178332-6184379 Solanum lycopersicum
Solyc07g016030.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 6178332-6183331 Solanum lycopersicum
Solyc07g016030.1 5.0kb downstream 5.0kb downstream 6048 true SL2.50ch07: 6183332-6189379 Solanum lycopersicum
Solyc07g016030.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 6184380-6189379 Solanum lycopersicum
Solyc07g016030.1 10.0kb upstream 10.0kb upstream 11048 true SL2.50ch07: 6173332-6184379 Solanum lycopersicum
Solyc07g016030.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 6173332-6183331 Solanum lycopersicum
Solyc07g016030.1 10.0kb downstream 10.0kb downstream 11048 true SL2.50ch07: 6183332-6194379 Solanum lycopersicum
Solyc07g016030.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 6184380-6194379 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121389990 5263 Asterids View MSA
123755512 5271 Pentapetalae View MSA
122796978 5272 Eudicot View MSA
122048497 5273 Angiosperm View MSA
121348486 5274 Embryophyte View MSA
123425712 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain