Gene : Solyc07g005340.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12775 - PROTEIN C20ORF43 HOMOLOG Description:  UPF0549 protein C20orf43 homolog (AHRD V1 *--- C1BN61_9MAXI); contains Interpro domain(s) IPR006735 Protein of unknown function DUF602
Genomic Order:  35 Name:  ? Solyc07g005340.1
Secondary Identifier:  ? PAC:36161639
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g005340.1 0.5kb upstream 0.5kb upstream 1682 true SL2.50ch07: 266473-268154 Solanum lycopersicum
Solyc07g005340.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 267655-268154 Solanum lycopersicum
Solyc07g005340.1 0.5kb downstream 0.5kb downstream 1682 true SL2.50ch07: 265973-267654 Solanum lycopersicum
Solyc07g005340.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 265973-266472 Solanum lycopersicum
Solyc07g005340.1 1.0kb upstream 1.0kb upstream 2182 true SL2.50ch07: 266473-268654 Solanum lycopersicum
Solyc07g005340.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 267655-268654 Solanum lycopersicum
Solyc07g005340.1 1.0kb downstream 1.0kb downstream 2182 true SL2.50ch07: 265473-267654 Solanum lycopersicum
Solyc07g005340.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 265473-266472 Solanum lycopersicum
Solyc07g005340.1 2.0kb upstream 2.0kb upstream 3182 true SL2.50ch07: 266473-269654 Solanum lycopersicum
Solyc07g005340.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 267655-269654 Solanum lycopersicum
Solyc07g005340.1 2.0kb downstream 2.0kb downstream 3182 true SL2.50ch07: 264473-267654 Solanum lycopersicum
Solyc07g005340.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 264473-266472 Solanum lycopersicum
Solyc07g005340.1 5.0kb upstream 5.0kb upstream 6182 true SL2.50ch07: 266473-272654 Solanum lycopersicum
Solyc07g005340.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 267655-272654 Solanum lycopersicum
Solyc07g005340.1 5.0kb downstream 5.0kb downstream 6182 true SL2.50ch07: 261473-267654 Solanum lycopersicum
Solyc07g005340.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 261473-266472 Solanum lycopersicum
Solyc07g005340.1 10.0kb upstream 10.0kb upstream 11182 true SL2.50ch07: 266473-277654 Solanum lycopersicum
Solyc07g005340.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 267655-277654 Solanum lycopersicum
Solyc07g005340.1 10.0kb downstream 10.0kb downstream 11182 true SL2.50ch07: 256473-267654 Solanum lycopersicum
Solyc07g005340.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 256473-266472 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468674 5263 Asterids View MSA
123747269 5271 Pentapetalae View MSA
122787080 5272 Eudicot View MSA
122046209 5273 Angiosperm View MSA
121350063 5274 Embryophyte View MSA
123426844 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain