Gene : Solyc07g005530.2 S. lycopersicum ITAG2.4
Defline:  (1 of 9) K11855 - ubiquitin carboxyl-terminal hydrolase 36/42 [EC:3.4.19.12] (USP36_42) Description:  Ubiquitin carboxyl-terminal hydrolase (AHRD V1 ***- D7MNY5_ARALY); contains Interpro domain(s) IPR001394 Peptidase C19, ubiquitin carboxyl-terminal hydrolase 2
Genomic Order:  54 Name:  ? Solyc07g005530.2
Secondary Identifier:  ? PAC:36160689
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g005530.2 0.5kb upstream 0.5kb upstream 8405 true SL2.50ch07: 420623-429027 Solanum lycopersicum
Solyc07g005530.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 420623-421122 Solanum lycopersicum
Solyc07g005530.2 0.5kb downstream 0.5kb downstream 8405 true SL2.50ch07: 421123-429527 Solanum lycopersicum
Solyc07g005530.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 429028-429527 Solanum lycopersicum
Solyc07g005530.2 1.0kb upstream 1.0kb upstream 8905 true SL2.50ch07: 420123-429027 Solanum lycopersicum
Solyc07g005530.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 420123-421122 Solanum lycopersicum
Solyc07g005530.2 1.0kb downstream 1.0kb downstream 8905 true SL2.50ch07: 421123-430027 Solanum lycopersicum
Solyc07g005530.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 429028-430027 Solanum lycopersicum
Solyc07g005530.2 2.0kb upstream 2.0kb upstream 9905 true SL2.50ch07: 419123-429027 Solanum lycopersicum
Solyc07g005530.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 419123-421122 Solanum lycopersicum
Solyc07g005530.2 2.0kb downstream 2.0kb downstream 9905 true SL2.50ch07: 421123-431027 Solanum lycopersicum
Solyc07g005530.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 429028-431027 Solanum lycopersicum
Solyc07g005530.2 5.0kb upstream 5.0kb upstream 12905 true SL2.50ch07: 416123-429027 Solanum lycopersicum
Solyc07g005530.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 416123-421122 Solanum lycopersicum
Solyc07g005530.2 5.0kb downstream 5.0kb downstream 12905 true SL2.50ch07: 421123-434027 Solanum lycopersicum
Solyc07g005530.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 429028-434027 Solanum lycopersicum
Solyc07g005530.2 10.0kb upstream 10.0kb upstream 17905 true SL2.50ch07: 411123-429027 Solanum lycopersicum
Solyc07g005530.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 411123-421122 Solanum lycopersicum
Solyc07g005530.2 10.0kb downstream 10.0kb downstream 17905 true SL2.50ch07: 421123-439027 Solanum lycopersicum
Solyc07g005530.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 429028-439027 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121466463 5263 Asterids View MSA
123736508 5271 Pentapetalae View MSA
122791057 5272 Eudicot View MSA
122046114 5273 Angiosperm View MSA
121344241 5274 Embryophyte View MSA
123424172 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain