Gene : Solyc08g083120.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) K02927//K08770 - large subunit ribosomal protein L40e (RP-L40e, RPL40) // ubiquitin C (UBC) Description:  Ubiquitin (AHRD V1 ***- C0SFI2_PARBP); contains Interpro domain(s) IPR019956 Ubiquitin subgroup
Genomic Order:  2434 Name:  ? Solyc08g083120.2
Secondary Identifier:  ? PAC:36149359
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g083120.2 0.5kb upstream 0.5kb upstream 1981 true SL2.50ch08: 65674654-65676634 Solanum lycopersicum
Solyc08g083120.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 65674654-65675153 Solanum lycopersicum
Solyc08g083120.2 0.5kb downstream 0.5kb downstream 1981 true SL2.50ch08: 65675154-65677134 Solanum lycopersicum
Solyc08g083120.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 65676635-65677134 Solanum lycopersicum
Solyc08g083120.2 1.0kb upstream 1.0kb upstream 2481 true SL2.50ch08: 65674154-65676634 Solanum lycopersicum
Solyc08g083120.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 65674154-65675153 Solanum lycopersicum
Solyc08g083120.2 1.0kb downstream 1.0kb downstream 2481 true SL2.50ch08: 65675154-65677634 Solanum lycopersicum
Solyc08g083120.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 65676635-65677634 Solanum lycopersicum
Solyc08g083120.2 2.0kb upstream 2.0kb upstream 3481 true SL2.50ch08: 65673154-65676634 Solanum lycopersicum
Solyc08g083120.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 65673154-65675153 Solanum lycopersicum
Solyc08g083120.2 2.0kb downstream 2.0kb downstream 3481 true SL2.50ch08: 65675154-65678634 Solanum lycopersicum
Solyc08g083120.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 65676635-65678634 Solanum lycopersicum
Solyc08g083120.2 5.0kb upstream 5.0kb upstream 6481 true SL2.50ch08: 65670154-65676634 Solanum lycopersicum
Solyc08g083120.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 65670154-65675153 Solanum lycopersicum
Solyc08g083120.2 5.0kb downstream 5.0kb downstream 6481 true SL2.50ch08: 65675154-65681634 Solanum lycopersicum
Solyc08g083120.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 65676635-65681634 Solanum lycopersicum
Solyc08g083120.2 10.0kb upstream 10.0kb upstream 11481 true SL2.50ch08: 65665154-65676634 Solanum lycopersicum
Solyc08g083120.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 65665154-65675153 Solanum lycopersicum
Solyc08g083120.2 10.0kb downstream 10.0kb downstream 11481 true SL2.50ch08: 65675154-65686634 Solanum lycopersicum
Solyc08g083120.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 65676635-65686634 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476235 5263 Asterids View MSA
123747920 5271 Pentapetalae View MSA
122794311 5272 Eudicot View MSA
122042303 5273 Angiosperm View MSA
121349234 5274 Embryophyte View MSA
123425972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain