Gene : Solyc07g007360.1 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PF13613 - Helix-turn-helix of DDE superfamily endonuclease (HTH_Tnp_4) Description:  Os07g0175100 protein (Fragment) (AHRD V1 ***- Q0D898_ORYSJ)
Genomic Order:  237 Name:  ? Solyc07g007360.1
Secondary Identifier:  ? PAC:36161530
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g007360.1 0.5kb upstream 0.5kb upstream 1841 true SL2.50ch07: 2102542-2104382 Solanum lycopersicum
Solyc07g007360.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 2103883-2104382 Solanum lycopersicum
Solyc07g007360.1 0.5kb downstream 0.5kb downstream 1841 true SL2.50ch07: 2102042-2103882 Solanum lycopersicum
Solyc07g007360.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 2102042-2102541 Solanum lycopersicum
Solyc07g007360.1 1.0kb upstream 1.0kb upstream 2341 true SL2.50ch07: 2102542-2104882 Solanum lycopersicum
Solyc07g007360.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 2103883-2104882 Solanum lycopersicum
Solyc07g007360.1 1.0kb downstream 1.0kb downstream 2341 true SL2.50ch07: 2101542-2103882 Solanum lycopersicum
Solyc07g007360.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 2101542-2102541 Solanum lycopersicum
Solyc07g007360.1 2.0kb upstream 2.0kb upstream 3341 true SL2.50ch07: 2102542-2105882 Solanum lycopersicum
Solyc07g007360.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 2103883-2105882 Solanum lycopersicum
Solyc07g007360.1 2.0kb downstream 2.0kb downstream 3341 true SL2.50ch07: 2100542-2103882 Solanum lycopersicum
Solyc07g007360.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 2100542-2102541 Solanum lycopersicum
Solyc07g007360.1 5.0kb upstream 5.0kb upstream 6341 true SL2.50ch07: 2102542-2108882 Solanum lycopersicum
Solyc07g007360.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 2103883-2108882 Solanum lycopersicum
Solyc07g007360.1 5.0kb downstream 5.0kb downstream 6341 true SL2.50ch07: 2097542-2103882 Solanum lycopersicum
Solyc07g007360.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 2097542-2102541 Solanum lycopersicum
Solyc07g007360.1 10.0kb upstream 10.0kb upstream 11341 true SL2.50ch07: 2102542-2113882 Solanum lycopersicum
Solyc07g007360.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 2103883-2113882 Solanum lycopersicum
Solyc07g007360.1 10.0kb downstream 10.0kb downstream 11341 true SL2.50ch07: 2092542-2103882 Solanum lycopersicum
Solyc07g007360.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 2092542-2102541 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481378 5263 Asterids View MSA
123744924 5271 Pentapetalae View MSA
122771301 5272 Eudicot View MSA
122043716 5273 Angiosperm View MSA
121348117 5274 Embryophyte View MSA
123380731 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain