Gene : Solyc07g007320.1 S. lycopersicum ITAG2.4

Defline:  (1 of 2) PTHR31065:SF11 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Description:  Zinc-binding protein (AHRD V1 *--- B6TVG2_MAIZE); contains Interpro domain(s) IPR006734 Protein of unknown function DUF597
Genomic Order:  233 Name:  ? Solyc07g007320.1
Secondary Identifier:  ? PAC:36160787

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g007320.1 0.5kb upstream 0.5kb upstream 1965 true SL2.50ch07: 2042022-2043986 Solanum lycopersicum
Solyc07g007320.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 2042022-2042521 Solanum lycopersicum
Solyc07g007320.1 0.5kb downstream 0.5kb downstream 1965 true SL2.50ch07: 2042522-2044486 Solanum lycopersicum
Solyc07g007320.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 2043987-2044486 Solanum lycopersicum
Solyc07g007320.1 1.0kb upstream 1.0kb upstream 2465 true SL2.50ch07: 2041522-2043986 Solanum lycopersicum
Solyc07g007320.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 2041522-2042521 Solanum lycopersicum
Solyc07g007320.1 1.0kb downstream 1.0kb downstream 2465 true SL2.50ch07: 2042522-2044986 Solanum lycopersicum
Solyc07g007320.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 2043987-2044986 Solanum lycopersicum
Solyc07g007320.1 2.0kb upstream 2.0kb upstream 3465 true SL2.50ch07: 2040522-2043986 Solanum lycopersicum
Solyc07g007320.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 2040522-2042521 Solanum lycopersicum
Solyc07g007320.1 2.0kb downstream 2.0kb downstream 3465 true SL2.50ch07: 2042522-2045986 Solanum lycopersicum
Solyc07g007320.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 2043987-2045986 Solanum lycopersicum
Solyc07g007320.1 5.0kb upstream 5.0kb upstream 6465 true SL2.50ch07: 2037522-2043986 Solanum lycopersicum
Solyc07g007320.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 2037522-2042521 Solanum lycopersicum
Solyc07g007320.1 5.0kb downstream 5.0kb downstream 6465 true SL2.50ch07: 2042522-2048986 Solanum lycopersicum
Solyc07g007320.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 2043987-2048986 Solanum lycopersicum
Solyc07g007320.1 10.0kb upstream 10.0kb upstream 11465 true SL2.50ch07: 2032522-2043986 Solanum lycopersicum
Solyc07g007320.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 2032522-2042521 Solanum lycopersicum
Solyc07g007320.1 10.0kb downstream 10.0kb downstream 11465 true SL2.50ch07: 2042522-2053986 Solanum lycopersicum
Solyc07g007320.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 2043987-2053986 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121481316 5263 Asterids View MSA
123747069 5271 Pentapetalae View MSA
122791391 5272 Eudicot View MSA
122044768 5273 Angiosperm View MSA
121349888 5274 Embryophyte View MSA
123428703 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain