Gene : Solyc07g005860.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR31807:SF2 - HAUS AUGMIN-LIKE COMPLEX SUBUNIT 8 Description:  Os02g0794300 protein (Fragment) (AHRD V1 *-*- Q0DWU9_ORYSJ); contains Interpro domain(s) IPR007573 Protein of unknown function DUF566
Genomic Order:  87 Name:  ? Solyc07g005860.2
Secondary Identifier:  ? PAC:36161550
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g005860.2 0.5kb upstream 0.5kb upstream 5771 true SL2.50ch07: 677311-683081 Solanum lycopersicum
Solyc07g005860.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 682582-683081 Solanum lycopersicum
Solyc07g005860.2 0.5kb downstream 0.5kb downstream 5771 true SL2.50ch07: 676811-682581 Solanum lycopersicum
Solyc07g005860.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 676811-677310 Solanum lycopersicum
Solyc07g005860.2 1.0kb upstream 1.0kb upstream 6271 true SL2.50ch07: 677311-683581 Solanum lycopersicum
Solyc07g005860.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 682582-683581 Solanum lycopersicum
Solyc07g005860.2 1.0kb downstream 1.0kb downstream 6271 true SL2.50ch07: 676311-682581 Solanum lycopersicum
Solyc07g005860.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 676311-677310 Solanum lycopersicum
Solyc07g005860.2 2.0kb upstream 2.0kb upstream 7271 true SL2.50ch07: 677311-684581 Solanum lycopersicum
Solyc07g005860.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 682582-684581 Solanum lycopersicum
Solyc07g005860.2 2.0kb downstream 2.0kb downstream 7271 true SL2.50ch07: 675311-682581 Solanum lycopersicum
Solyc07g005860.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 675311-677310 Solanum lycopersicum
Solyc07g005860.2 5.0kb upstream 5.0kb upstream 10271 true SL2.50ch07: 677311-687581 Solanum lycopersicum
Solyc07g005860.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 682582-687581 Solanum lycopersicum
Solyc07g005860.2 5.0kb downstream 5.0kb downstream 10271 true SL2.50ch07: 672311-682581 Solanum lycopersicum
Solyc07g005860.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 672311-677310 Solanum lycopersicum
Solyc07g005860.2 10.0kb upstream 10.0kb upstream 15271 true SL2.50ch07: 677311-692581 Solanum lycopersicum
Solyc07g005860.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 682582-692581 Solanum lycopersicum
Solyc07g005860.2 10.0kb downstream 10.0kb downstream 15271 true SL2.50ch07: 667311-682581 Solanum lycopersicum
Solyc07g005860.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 667311-677310 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473739 5263 Asterids View MSA
123747481 5271 Pentapetalae View MSA
122790294 5272 Eudicot View MSA
122050322 5273 Angiosperm View MSA
121348675 5274 Embryophyte View MSA
123426167 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain