Gene : Solyc07g006250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K03022 - DNA-directed RNA polymerase III subunit RPC8 (RPC8, POLR3H) Description:  DNA-directed RNA polymerase III subunit RPC8 (AHRD V1 ***- RPC8_HUMAN); contains Interpro domain(s) IPR013238 RNA polymerase III, subunit Rpc25
Genomic Order:  126 Name:  ? Solyc07g006250.2
Secondary Identifier:  ? PAC:36160391
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g006250.2 0.5kb upstream 0.5kb upstream 2497 true SL2.50ch07: 1052234-1054730 Solanum lycopersicum
Solyc07g006250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 1052234-1052733 Solanum lycopersicum
Solyc07g006250.2 0.5kb downstream 0.5kb downstream 2497 true SL2.50ch07: 1052734-1055230 Solanum lycopersicum
Solyc07g006250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 1054731-1055230 Solanum lycopersicum
Solyc07g006250.2 1.0kb upstream 1.0kb upstream 2997 true SL2.50ch07: 1051734-1054730 Solanum lycopersicum
Solyc07g006250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 1051734-1052733 Solanum lycopersicum
Solyc07g006250.2 1.0kb downstream 1.0kb downstream 2997 true SL2.50ch07: 1052734-1055730 Solanum lycopersicum
Solyc07g006250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 1054731-1055730 Solanum lycopersicum
Solyc07g006250.2 2.0kb upstream 2.0kb upstream 3997 true SL2.50ch07: 1050734-1054730 Solanum lycopersicum
Solyc07g006250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 1050734-1052733 Solanum lycopersicum
Solyc07g006250.2 2.0kb downstream 2.0kb downstream 3997 true SL2.50ch07: 1052734-1056730 Solanum lycopersicum
Solyc07g006250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 1054731-1056730 Solanum lycopersicum
Solyc07g006250.2 5.0kb upstream 5.0kb upstream 6997 true SL2.50ch07: 1047734-1054730 Solanum lycopersicum
Solyc07g006250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 1047734-1052733 Solanum lycopersicum
Solyc07g006250.2 5.0kb downstream 5.0kb downstream 6997 true SL2.50ch07: 1052734-1059730 Solanum lycopersicum
Solyc07g006250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 1054731-1059730 Solanum lycopersicum
Solyc07g006250.2 10.0kb upstream 10.0kb upstream 11997 true SL2.50ch07: 1042734-1054730 Solanum lycopersicum
Solyc07g006250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 1042734-1052733 Solanum lycopersicum
Solyc07g006250.2 10.0kb downstream 10.0kb downstream 11997 true SL2.50ch07: 1052734-1064730 Solanum lycopersicum
Solyc07g006250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 1054731-1064730 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027020 5273 Angiosperm View MSA
121368775 5263 Asterids Singleton cluster - no MSA
123750030 5271 Pentapetalae View MSA
122773432 5272 Eudicot View MSA
121296744 5274 Embryophyte View MSA
123334862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain