Gene : Solyc07g006160.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR12169:SF6 - LACTATION ELEVATED PROTEIN 1 Description:  AFG1-family ATPase (AHRD V1 **** D1CU44_9RHIZ); contains Interpro domain(s) IPR005654 ATPase, AFG1-like
Genomic Order:  117 Name:  ? Solyc07g006160.2
Secondary Identifier:  ? PAC:36161861
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ANAEROFRUCAT-PWY Solanum lycopersicum pathologic  
Slycopersicum ANAGLYCOLYSIS-PWY Solanum lycopersicum pathologic  
Slycopersicum GLUCOSE1PMETAB-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-621 Solanum lycopersicum pathologic  
Slycopersicum PWY-7238 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc07g006160.2 0.5kb upstream 0.5kb upstream 5631 true SL2.50ch07: 997531-1003161 Solanum lycopersicum
Solyc07g006160.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch07: 997531-998030 Solanum lycopersicum
Solyc07g006160.2 0.5kb downstream 0.5kb downstream 5631 true SL2.50ch07: 998031-1003661 Solanum lycopersicum
Solyc07g006160.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch07: 1003162-1003661 Solanum lycopersicum
Solyc07g006160.2 1.0kb upstream 1.0kb upstream 6131 true SL2.50ch07: 997031-1003161 Solanum lycopersicum
Solyc07g006160.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch07: 997031-998030 Solanum lycopersicum
Solyc07g006160.2 1.0kb downstream 1.0kb downstream 6131 true SL2.50ch07: 998031-1004161 Solanum lycopersicum
Solyc07g006160.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch07: 1003162-1004161 Solanum lycopersicum
Solyc07g006160.2 2.0kb upstream 2.0kb upstream 7131 true SL2.50ch07: 996031-1003161 Solanum lycopersicum
Solyc07g006160.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch07: 996031-998030 Solanum lycopersicum
Solyc07g006160.2 2.0kb downstream 2.0kb downstream 7131 true SL2.50ch07: 998031-1005161 Solanum lycopersicum
Solyc07g006160.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch07: 1003162-1005161 Solanum lycopersicum
Solyc07g006160.2 5.0kb upstream 5.0kb upstream 10131 true SL2.50ch07: 993031-1003161 Solanum lycopersicum
Solyc07g006160.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch07: 993031-998030 Solanum lycopersicum
Solyc07g006160.2 5.0kb downstream 5.0kb downstream 10131 true SL2.50ch07: 998031-1008161 Solanum lycopersicum
Solyc07g006160.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch07: 1003162-1008161 Solanum lycopersicum
Solyc07g006160.2 10.0kb upstream 10.0kb upstream 15131 true SL2.50ch07: 988031-1003161 Solanum lycopersicum
Solyc07g006160.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch07: 988031-998030 Solanum lycopersicum
Solyc07g006160.2 10.0kb downstream 10.0kb downstream 15131 true SL2.50ch07: 998031-1013161 Solanum lycopersicum
Solyc07g006160.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch07: 1003162-1013161 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121470841 5263 Asterids View MSA
123752091 5271 Pentapetalae View MSA
122793026 5272 Eudicot View MSA
122047660 5273 Angiosperm View MSA
121344773 5274 Embryophyte View MSA
123427307 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain