Gene : Solyc08g080960.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31500:SF9 - AT HOOK MOTIF DNA-BINDING FAMILY PROTEIN Description:  AT-hook motif nuclear localized protein 1 (AHRD V1 ***- O04696_PEA); contains Interpro domain(s) IPR005175 Protein of unknown function DUF296
Genomic Order:  2219 Name:  ? Solyc08g080960.2
Secondary Identifier:  ? PAC:36150770
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g080960.2 0.5kb upstream 0.5kb upstream 5448 true SL2.50ch08: 64088917-64094364 Solanum lycopersicum
Solyc08g080960.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 64093865-64094364 Solanum lycopersicum
Solyc08g080960.2 0.5kb downstream 0.5kb downstream 5448 true SL2.50ch08: 64088417-64093864 Solanum lycopersicum
Solyc08g080960.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 64088417-64088916 Solanum lycopersicum
Solyc08g080960.2 1.0kb upstream 1.0kb upstream 5948 true SL2.50ch08: 64088917-64094864 Solanum lycopersicum
Solyc08g080960.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 64093865-64094864 Solanum lycopersicum
Solyc08g080960.2 1.0kb downstream 1.0kb downstream 5948 true SL2.50ch08: 64087917-64093864 Solanum lycopersicum
Solyc08g080960.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 64087917-64088916 Solanum lycopersicum
Solyc08g080960.2 2.0kb upstream 2.0kb upstream 6948 true SL2.50ch08: 64088917-64095864 Solanum lycopersicum
Solyc08g080960.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 64093865-64095864 Solanum lycopersicum
Solyc08g080960.2 2.0kb downstream 2.0kb downstream 6948 true SL2.50ch08: 64086917-64093864 Solanum lycopersicum
Solyc08g080960.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 64086917-64088916 Solanum lycopersicum
Solyc08g080960.2 5.0kb upstream 5.0kb upstream 9948 true SL2.50ch08: 64088917-64098864 Solanum lycopersicum
Solyc08g080960.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 64093865-64098864 Solanum lycopersicum
Solyc08g080960.2 5.0kb downstream 5.0kb downstream 9948 true SL2.50ch08: 64083917-64093864 Solanum lycopersicum
Solyc08g080960.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 64083917-64088916 Solanum lycopersicum
Solyc08g080960.2 10.0kb upstream 10.0kb upstream 14948 true SL2.50ch08: 64088917-64103864 Solanum lycopersicum
Solyc08g080960.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 64093865-64103864 Solanum lycopersicum
Solyc08g080960.2 10.0kb downstream 10.0kb downstream 14948 true SL2.50ch08: 64078917-64093864 Solanum lycopersicum
Solyc08g080960.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 64078917-64088916 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041209 5273 Angiosperm View MSA
121480524 5263 Asterids View MSA
123741988 5271 Pentapetalae View MSA
122789787 5272 Eudicot View MSA
121348420 5274 Embryophyte View MSA
123380859 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain