Gene : Solyc08g079830.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K04569 - copper chaperone for superoxide dismutase (CCS) Description:  Cu/Zn-superoxide dismutase copper chaperone (AHRD V1 **** Q9BBU5_SOYBN); contains Interpro domain(s) IPR001424 Superoxide dismutase, copper/zinc binding
Genomic Order:  2106 Name:  ? Solyc08g079830.2
Secondary Identifier:  ? PAC:36149124
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g079830.2 0.5kb upstream 0.5kb upstream 3518 true SL2.50ch08: 63275494-63279011 Solanum lycopersicum
Solyc08g079830.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 63278512-63279011 Solanum lycopersicum
Solyc08g079830.2 0.5kb downstream 0.5kb downstream 3518 true SL2.50ch08: 63274994-63278511 Solanum lycopersicum
Solyc08g079830.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 63274994-63275493 Solanum lycopersicum
Solyc08g079830.2 1.0kb upstream 1.0kb upstream 4018 true SL2.50ch08: 63275494-63279511 Solanum lycopersicum
Solyc08g079830.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 63278512-63279511 Solanum lycopersicum
Solyc08g079830.2 1.0kb downstream 1.0kb downstream 4018 true SL2.50ch08: 63274494-63278511 Solanum lycopersicum
Solyc08g079830.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 63274494-63275493 Solanum lycopersicum
Solyc08g079830.2 2.0kb upstream 2.0kb upstream 5018 true SL2.50ch08: 63275494-63280511 Solanum lycopersicum
Solyc08g079830.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 63278512-63280511 Solanum lycopersicum
Solyc08g079830.2 2.0kb downstream 2.0kb downstream 5018 true SL2.50ch08: 63273494-63278511 Solanum lycopersicum
Solyc08g079830.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 63273494-63275493 Solanum lycopersicum
Solyc08g079830.2 5.0kb upstream 5.0kb upstream 8018 true SL2.50ch08: 63275494-63283511 Solanum lycopersicum
Solyc08g079830.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 63278512-63283511 Solanum lycopersicum
Solyc08g079830.2 5.0kb downstream 5.0kb downstream 8018 true SL2.50ch08: 63270494-63278511 Solanum lycopersicum
Solyc08g079830.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 63270494-63275493 Solanum lycopersicum
Solyc08g079830.2 10.0kb upstream 10.0kb upstream 13018 true SL2.50ch08: 63275494-63288511 Solanum lycopersicum
Solyc08g079830.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 63278512-63288511 Solanum lycopersicum
Solyc08g079830.2 10.0kb downstream 10.0kb downstream 13018 true SL2.50ch08: 63265494-63278511 Solanum lycopersicum
Solyc08g079830.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 63265494-63275493 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471454 5263 Asterids View MSA
123739046 5271 Pentapetalae View MSA
122793199 5272 Eudicot View MSA
122046170 5273 Angiosperm View MSA
121346754 5274 Embryophyte View MSA
123425336 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain