Gene : Solyc08g079750.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K14270 - aminotransferase (ACS10_12) Description:  1-aminocyclopropane-1-carboxylate synthase (AHRD V1 **** Q6U5H3_ROSHC); contains Interpro domain(s) IPR004839 Aminotransferase, class I and II
Genomic Order:  2098 Name:  ? Solyc08g079750.2
Secondary Identifier:  ? PAC:36149976
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum ETHYL-PWY Solanum lycopersicum pathologic  
Slycopersicum PWY-7270 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g079750.2 0.5kb upstream 0.5kb upstream 4081 true SL2.50ch08: 63235804-63239884 Solanum lycopersicum
Solyc08g079750.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 63239385-63239884 Solanum lycopersicum
Solyc08g079750.2 0.5kb downstream 0.5kb downstream 4081 true SL2.50ch08: 63235304-63239384 Solanum lycopersicum
Solyc08g079750.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 63235304-63235803 Solanum lycopersicum
Solyc08g079750.2 1.0kb upstream 1.0kb upstream 4581 true SL2.50ch08: 63235804-63240384 Solanum lycopersicum
Solyc08g079750.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 63239385-63240384 Solanum lycopersicum
Solyc08g079750.2 1.0kb downstream 1.0kb downstream 4581 true SL2.50ch08: 63234804-63239384 Solanum lycopersicum
Solyc08g079750.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 63234804-63235803 Solanum lycopersicum
Solyc08g079750.2 2.0kb upstream 2.0kb upstream 5581 true SL2.50ch08: 63235804-63241384 Solanum lycopersicum
Solyc08g079750.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 63239385-63241384 Solanum lycopersicum
Solyc08g079750.2 2.0kb downstream 2.0kb downstream 5581 true SL2.50ch08: 63233804-63239384 Solanum lycopersicum
Solyc08g079750.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 63233804-63235803 Solanum lycopersicum
Solyc08g079750.2 5.0kb upstream 5.0kb upstream 8581 true SL2.50ch08: 63235804-63244384 Solanum lycopersicum
Solyc08g079750.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 63239385-63244384 Solanum lycopersicum
Solyc08g079750.2 5.0kb downstream 5.0kb downstream 8581 true SL2.50ch08: 63230804-63239384 Solanum lycopersicum
Solyc08g079750.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 63230804-63235803 Solanum lycopersicum
Solyc08g079750.2 10.0kb upstream 10.0kb upstream 13581 true SL2.50ch08: 63235804-63249384 Solanum lycopersicum
Solyc08g079750.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 63239385-63249384 Solanum lycopersicum
Solyc08g079750.2 10.0kb downstream 10.0kb downstream 13581 true SL2.50ch08: 63225804-63239384 Solanum lycopersicum
Solyc08g079750.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 63225804-63235803 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121473979 5263 Asterids View MSA
123749397 5271 Pentapetalae View MSA
122792167 5272 Eudicot View MSA
122042730 5273 Angiosperm View MSA
121351183 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain