Gene : Solyc08g079660.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR11638//PTHR11638:SF105 - ATP-DEPENDENT CLP PROTEASE // SUBFAMILY NOT NAMED Description:  ATP-dependent Clp protease ATP-binding subunit ClpC (AHRD V1 *-*- D5A5L7_SPIPL); contains Interpro domain(s) IPR004176 Clp, N-terminal
Genomic Order:  2089 Name:  ? Solyc08g079660.2
Secondary Identifier:  ? PAC:36149176
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g079660.2 0.5kb upstream 0.5kb upstream 3985 true SL2.50ch08: 63148725-63152709 Solanum lycopersicum
Solyc08g079660.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 63152210-63152709 Solanum lycopersicum
Solyc08g079660.2 0.5kb downstream 0.5kb downstream 3985 true SL2.50ch08: 63148225-63152209 Solanum lycopersicum
Solyc08g079660.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 63148225-63148724 Solanum lycopersicum
Solyc08g079660.2 1.0kb upstream 1.0kb upstream 4485 true SL2.50ch08: 63148725-63153209 Solanum lycopersicum
Solyc08g079660.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 63152210-63153209 Solanum lycopersicum
Solyc08g079660.2 1.0kb downstream 1.0kb downstream 4485 true SL2.50ch08: 63147725-63152209 Solanum lycopersicum
Solyc08g079660.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 63147725-63148724 Solanum lycopersicum
Solyc08g079660.2 2.0kb upstream 2.0kb upstream 5485 true SL2.50ch08: 63148725-63154209 Solanum lycopersicum
Solyc08g079660.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 63152210-63154209 Solanum lycopersicum
Solyc08g079660.2 2.0kb downstream 2.0kb downstream 5485 true SL2.50ch08: 63146725-63152209 Solanum lycopersicum
Solyc08g079660.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 63146725-63148724 Solanum lycopersicum
Solyc08g079660.2 5.0kb upstream 5.0kb upstream 8485 true SL2.50ch08: 63148725-63157209 Solanum lycopersicum
Solyc08g079660.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 63152210-63157209 Solanum lycopersicum
Solyc08g079660.2 5.0kb downstream 5.0kb downstream 8485 true SL2.50ch08: 63143725-63152209 Solanum lycopersicum
Solyc08g079660.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 63143725-63148724 Solanum lycopersicum
Solyc08g079660.2 10.0kb upstream 10.0kb upstream 13485 true SL2.50ch08: 63148725-63162209 Solanum lycopersicum
Solyc08g079660.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 63152210-63162209 Solanum lycopersicum
Solyc08g079660.2 10.0kb downstream 10.0kb downstream 13485 true SL2.50ch08: 63138725-63152209 Solanum lycopersicum
Solyc08g079660.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 63138725-63148724 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467686 5263 Asterids View MSA
123741380 5271 Pentapetalae View MSA
122789129 5272 Eudicot View MSA
122047723 5273 Angiosperm View MSA
121348075 5274 Embryophyte View MSA
123425862 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain