Gene : Solyc08g079480.2 S. lycopersicum ITAG2.4
Defline:  (1 of 3) PTHR33593:SF2 - F5O11.5 Description:  Unknown Protein (AHRD V1); contains Interpro domain(s) IPR009902 Protein of unknown function DUF1442
Genomic Order:  2071 Name:  ? Solyc08g079480.2
Secondary Identifier:  ? PAC:36149743
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g079480.2 0.5kb upstream 0.5kb upstream 1528 true SL2.50ch08: 62997940-62999467 Solanum lycopersicum
Solyc08g079480.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 62997940-62998439 Solanum lycopersicum
Solyc08g079480.2 0.5kb downstream 0.5kb downstream 1528 true SL2.50ch08: 62998440-62999967 Solanum lycopersicum
Solyc08g079480.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 62999468-62999967 Solanum lycopersicum
Solyc08g079480.2 1.0kb upstream 1.0kb upstream 2028 true SL2.50ch08: 62997440-62999467 Solanum lycopersicum
Solyc08g079480.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 62997440-62998439 Solanum lycopersicum
Solyc08g079480.2 1.0kb downstream 1.0kb downstream 2028 true SL2.50ch08: 62998440-63000467 Solanum lycopersicum
Solyc08g079480.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 62999468-63000467 Solanum lycopersicum
Solyc08g079480.2 2.0kb upstream 2.0kb upstream 3028 true SL2.50ch08: 62996440-62999467 Solanum lycopersicum
Solyc08g079480.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 62996440-62998439 Solanum lycopersicum
Solyc08g079480.2 2.0kb downstream 2.0kb downstream 3028 true SL2.50ch08: 62998440-63001467 Solanum lycopersicum
Solyc08g079480.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 62999468-63001467 Solanum lycopersicum
Solyc08g079480.2 5.0kb upstream 5.0kb upstream 6028 true SL2.50ch08: 62993440-62999467 Solanum lycopersicum
Solyc08g079480.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 62993440-62998439 Solanum lycopersicum
Solyc08g079480.2 5.0kb downstream 5.0kb downstream 6028 true SL2.50ch08: 62998440-63004467 Solanum lycopersicum
Solyc08g079480.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 62999468-63004467 Solanum lycopersicum
Solyc08g079480.2 10.0kb upstream 10.0kb upstream 11028 true SL2.50ch08: 62988440-62999467 Solanum lycopersicum
Solyc08g079480.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 62988440-62998439 Solanum lycopersicum
Solyc08g079480.2 10.0kb downstream 10.0kb downstream 11028 true SL2.50ch08: 62998440-63009467 Solanum lycopersicum
Solyc08g079480.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 62999468-63009467 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041482 5273 Angiosperm View MSA
121467767 5263 Asterids View MSA
123743657 5271 Pentapetalae View MSA
122790548 5272 Eudicot View MSA
121348528 5274 Embryophyte View MSA
123380900 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain