Gene : Solyc08g079470.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) K06980 - uncharacterized protein (K06980) Description:  tRNA-modifying protein ygfZ (AHRD V1 *-*- YGFZ_SALTY); contains Interpro domain(s) IPR017703 Folate-binding, YgfZ
Genomic Order:  2070 Name:  ? Solyc08g079470.2
Secondary Identifier:  ? PAC:36150266
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Ontology Annotation Displayer

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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g079470.2 0.5kb upstream 0.5kb upstream 5927 true SL2.50ch08: 62986858-62992784 Solanum lycopersicum
Solyc08g079470.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 62992285-62992784 Solanum lycopersicum
Solyc08g079470.2 0.5kb downstream 0.5kb downstream 5927 true SL2.50ch08: 62986358-62992284 Solanum lycopersicum
Solyc08g079470.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 62986358-62986857 Solanum lycopersicum
Solyc08g079470.2 1.0kb upstream 1.0kb upstream 6427 true SL2.50ch08: 62986858-62993284 Solanum lycopersicum
Solyc08g079470.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 62992285-62993284 Solanum lycopersicum
Solyc08g079470.2 1.0kb downstream 1.0kb downstream 6427 true SL2.50ch08: 62985858-62992284 Solanum lycopersicum
Solyc08g079470.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 62985858-62986857 Solanum lycopersicum
Solyc08g079470.2 2.0kb upstream 2.0kb upstream 7427 true SL2.50ch08: 62986858-62994284 Solanum lycopersicum
Solyc08g079470.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 62992285-62994284 Solanum lycopersicum
Solyc08g079470.2 2.0kb downstream 2.0kb downstream 7427 true SL2.50ch08: 62984858-62992284 Solanum lycopersicum
Solyc08g079470.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 62984858-62986857 Solanum lycopersicum
Solyc08g079470.2 5.0kb upstream 5.0kb upstream 10427 true SL2.50ch08: 62986858-62997284 Solanum lycopersicum
Solyc08g079470.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 62992285-62997284 Solanum lycopersicum
Solyc08g079470.2 5.0kb downstream 5.0kb downstream 10427 true SL2.50ch08: 62981858-62992284 Solanum lycopersicum
Solyc08g079470.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 62981858-62986857 Solanum lycopersicum
Solyc08g079470.2 10.0kb upstream 10.0kb upstream 15427 true SL2.50ch08: 62986858-63002284 Solanum lycopersicum
Solyc08g079470.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 62992285-63002284 Solanum lycopersicum
Solyc08g079470.2 10.0kb downstream 10.0kb downstream 15427 true SL2.50ch08: 62976858-62992284 Solanum lycopersicum
Solyc08g079470.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 62976858-62986857 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121478178 5263 Asterids View MSA
123745286 5271 Pentapetalae View MSA
122786826 5272 Eudicot View MSA
122047678 5273 Angiosperm View MSA
121345221 5274 Embryophyte View MSA
123428171 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain