Gene : Solyc08g080050.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) PTHR31032:SF1 - PGR5-LIKE PROTEIN 1A, CHLOROPLASTIC-RELATED Description:  PGR5-like protein 1A, chloroplastic (AHRD V1 ***- PGL1A_ARATH)
Genomic Order:  2128 Name:  ? Solyc08g080050.2
Secondary Identifier:  ? PAC:36149810
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g080050.2 0.5kb upstream 0.5kb upstream 5003 true SL2.50ch08: 63388955-63393957 Solanum lycopersicum
Solyc08g080050.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 63388955-63389454 Solanum lycopersicum
Solyc08g080050.2 0.5kb downstream 0.5kb downstream 5003 true SL2.50ch08: 63389455-63394457 Solanum lycopersicum
Solyc08g080050.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 63393958-63394457 Solanum lycopersicum
Solyc08g080050.2 1.0kb upstream 1.0kb upstream 5503 true SL2.50ch08: 63388455-63393957 Solanum lycopersicum
Solyc08g080050.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 63388455-63389454 Solanum lycopersicum
Solyc08g080050.2 1.0kb downstream 1.0kb downstream 5503 true SL2.50ch08: 63389455-63394957 Solanum lycopersicum
Solyc08g080050.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 63393958-63394957 Solanum lycopersicum
Solyc08g080050.2 2.0kb upstream 2.0kb upstream 6503 true SL2.50ch08: 63387455-63393957 Solanum lycopersicum
Solyc08g080050.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 63387455-63389454 Solanum lycopersicum
Solyc08g080050.2 2.0kb downstream 2.0kb downstream 6503 true SL2.50ch08: 63389455-63395957 Solanum lycopersicum
Solyc08g080050.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 63393958-63395957 Solanum lycopersicum
Solyc08g080050.2 5.0kb upstream 5.0kb upstream 9503 true SL2.50ch08: 63384455-63393957 Solanum lycopersicum
Solyc08g080050.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 63384455-63389454 Solanum lycopersicum
Solyc08g080050.2 5.0kb downstream 5.0kb downstream 9503 true SL2.50ch08: 63389455-63398957 Solanum lycopersicum
Solyc08g080050.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 63393958-63398957 Solanum lycopersicum
Solyc08g080050.2 10.0kb upstream 10.0kb upstream 14503 true SL2.50ch08: 63379455-63393957 Solanum lycopersicum
Solyc08g080050.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 63379455-63389454 Solanum lycopersicum
Solyc08g080050.2 10.0kb downstream 10.0kb downstream 14503 true SL2.50ch08: 63389455-63403957 Solanum lycopersicum
Solyc08g080050.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 63393958-63403957 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121480496 5263 Asterids View MSA
123741079 5271 Pentapetalae View MSA
122790680 5272 Eudicot View MSA
122043689 5273 Angiosperm View MSA
121345999 5274 Embryophyte View MSA
123428179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain