Gene : Solyc08g082500.1 S. lycopersicum ITAG2.4
Defline:  (1 of 4) PTHR22835:SF281 - SGNH HYDROLASE-TYPE ESTERASE SUPERFAMILY PROTEIN Description:  GDSL esterase/lipase At1g33811 (AHRD V1 ***- GDL17_ARATH); contains Interpro domain(s) IPR001087 Lipase, GDSL
Genomic Order:  2372 Name:  ? Solyc08g082500.1
Secondary Identifier:  ? PAC:36150852
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum LIPAS-PWY Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g082500.1 0.5kb upstream 0.5kb upstream 1590 true SL2.50ch08: 65273586-65275175 Solanum lycopersicum
Solyc08g082500.1 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 65274676-65275175 Solanum lycopersicum
Solyc08g082500.1 0.5kb downstream 0.5kb downstream 1590 true SL2.50ch08: 65273086-65274675 Solanum lycopersicum
Solyc08g082500.1 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 65273086-65273585 Solanum lycopersicum
Solyc08g082500.1 1.0kb upstream 1.0kb upstream 2090 true SL2.50ch08: 65273586-65275675 Solanum lycopersicum
Solyc08g082500.1 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 65274676-65275675 Solanum lycopersicum
Solyc08g082500.1 1.0kb downstream 1.0kb downstream 2090 true SL2.50ch08: 65272586-65274675 Solanum lycopersicum
Solyc08g082500.1 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 65272586-65273585 Solanum lycopersicum
Solyc08g082500.1 2.0kb upstream 2.0kb upstream 3090 true SL2.50ch08: 65273586-65276675 Solanum lycopersicum
Solyc08g082500.1 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 65274676-65276675 Solanum lycopersicum
Solyc08g082500.1 2.0kb downstream 2.0kb downstream 3090 true SL2.50ch08: 65271586-65274675 Solanum lycopersicum
Solyc08g082500.1 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 65271586-65273585 Solanum lycopersicum
Solyc08g082500.1 5.0kb upstream 5.0kb upstream 6090 true SL2.50ch08: 65273586-65279675 Solanum lycopersicum
Solyc08g082500.1 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 65274676-65279675 Solanum lycopersicum
Solyc08g082500.1 5.0kb downstream 5.0kb downstream 6090 true SL2.50ch08: 65268586-65274675 Solanum lycopersicum
Solyc08g082500.1 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 65268586-65273585 Solanum lycopersicum
Solyc08g082500.1 10.0kb upstream 10.0kb upstream 11090 true SL2.50ch08: 65273586-65284675 Solanum lycopersicum
Solyc08g082500.1 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 65274676-65284675 Solanum lycopersicum
Solyc08g082500.1 10.0kb downstream 10.0kb downstream 11090 true SL2.50ch08: 65263586-65274675 Solanum lycopersicum
Solyc08g082500.1 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 65263586-65273585 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121482587 5263 Asterids View MSA
123753785 5271 Pentapetalae View MSA
122797352 5272 Eudicot View MSA
122051674 5273 Angiosperm View MSA
121351762 5274 Embryophyte View MSA
123428079 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain