Gene : Solyc08g081170.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23135:SF16 - UDP-N-ACETYLMUAMOYLALANYL-D-GLUTAMATE-2,6-DIAMINOPIMELATE LIGASE-RELATED Description:  UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2 6-diaminopimelate ligase (AHRD V1 *-** D7UXP7_LISGR); contains Interpro domain(s) IPR005761 UDP-N-acetylmuramoylalanyl-D-glutamate-2,6-diaminopimelate ligase
Genomic Order:  2240 Name:  ? Solyc08g081170.2
Secondary Identifier:  ? PAC:36149582
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g081170.2 0.5kb upstream 0.5kb upstream 4927 true SL2.50ch08: 64242219-64247145 Solanum lycopersicum
Solyc08g081170.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 64242219-64242718 Solanum lycopersicum
Solyc08g081170.2 0.5kb downstream 0.5kb downstream 4927 true SL2.50ch08: 64242719-64247645 Solanum lycopersicum
Solyc08g081170.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 64247146-64247645 Solanum lycopersicum
Solyc08g081170.2 1.0kb upstream 1.0kb upstream 5427 true SL2.50ch08: 64241719-64247145 Solanum lycopersicum
Solyc08g081170.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 64241719-64242718 Solanum lycopersicum
Solyc08g081170.2 1.0kb downstream 1.0kb downstream 5427 true SL2.50ch08: 64242719-64248145 Solanum lycopersicum
Solyc08g081170.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 64247146-64248145 Solanum lycopersicum
Solyc08g081170.2 2.0kb upstream 2.0kb upstream 6427 true SL2.50ch08: 64240719-64247145 Solanum lycopersicum
Solyc08g081170.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 64240719-64242718 Solanum lycopersicum
Solyc08g081170.2 2.0kb downstream 2.0kb downstream 6427 true SL2.50ch08: 64242719-64249145 Solanum lycopersicum
Solyc08g081170.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 64247146-64249145 Solanum lycopersicum
Solyc08g081170.2 5.0kb upstream 5.0kb upstream 9427 true SL2.50ch08: 64237719-64247145 Solanum lycopersicum
Solyc08g081170.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 64237719-64242718 Solanum lycopersicum
Solyc08g081170.2 5.0kb downstream 5.0kb downstream 9427 true SL2.50ch08: 64242719-64252145 Solanum lycopersicum
Solyc08g081170.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 64247146-64252145 Solanum lycopersicum
Solyc08g081170.2 10.0kb upstream 10.0kb upstream 14427 true SL2.50ch08: 64232719-64247145 Solanum lycopersicum
Solyc08g081170.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 64232719-64242718 Solanum lycopersicum
Solyc08g081170.2 10.0kb downstream 10.0kb downstream 14427 true SL2.50ch08: 64242719-64257145 Solanum lycopersicum
Solyc08g081170.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 64247146-64257145 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121471841 5263 Asterids View MSA
123746707 5271 Pentapetalae View MSA
122792589 5272 Eudicot View MSA
122042880 5273 Angiosperm View MSA
121344951 5274 Embryophyte View MSA
123428207 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain