Gene : Solyc08g081570.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) 4.6.1.12 - 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase / MECDP-synthase Description:  2-C-methyl-D-erythritol 2 4-cyclodiphosphate synthase (AHRD V1 **** A9ZN13_HEVBR); contains Interpro domain(s) IPR003526 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase, core
Genomic Order:  2279 Name:  ? Solyc08g081570.2
Secondary Identifier:  ? PAC:36151348
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY-7560 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g081570.2 0.5kb upstream 0.5kb upstream 5294 true SL2.50ch08: 64585474-64590767 Solanum lycopersicum
Solyc08g081570.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 64590268-64590767 Solanum lycopersicum
Solyc08g081570.2 0.5kb downstream 0.5kb downstream 5294 true SL2.50ch08: 64584974-64590267 Solanum lycopersicum
Solyc08g081570.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 64584974-64585473 Solanum lycopersicum
Solyc08g081570.2 1.0kb upstream 1.0kb upstream 5794 true SL2.50ch08: 64585474-64591267 Solanum lycopersicum
Solyc08g081570.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 64590268-64591267 Solanum lycopersicum
Solyc08g081570.2 1.0kb downstream 1.0kb downstream 5794 true SL2.50ch08: 64584474-64590267 Solanum lycopersicum
Solyc08g081570.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 64584474-64585473 Solanum lycopersicum
Solyc08g081570.2 2.0kb upstream 2.0kb upstream 6794 true SL2.50ch08: 64585474-64592267 Solanum lycopersicum
Solyc08g081570.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 64590268-64592267 Solanum lycopersicum
Solyc08g081570.2 2.0kb downstream 2.0kb downstream 6794 true SL2.50ch08: 64583474-64590267 Solanum lycopersicum
Solyc08g081570.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 64583474-64585473 Solanum lycopersicum
Solyc08g081570.2 5.0kb upstream 5.0kb upstream 9794 true SL2.50ch08: 64585474-64595267 Solanum lycopersicum
Solyc08g081570.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 64590268-64595267 Solanum lycopersicum
Solyc08g081570.2 5.0kb downstream 5.0kb downstream 9794 true SL2.50ch08: 64580474-64590267 Solanum lycopersicum
Solyc08g081570.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 64580474-64585473 Solanum lycopersicum
Solyc08g081570.2 10.0kb upstream 10.0kb upstream 14794 true SL2.50ch08: 64585474-64600267 Solanum lycopersicum
Solyc08g081570.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 64590268-64600267 Solanum lycopersicum
Solyc08g081570.2 10.0kb downstream 10.0kb downstream 14794 true SL2.50ch08: 64575474-64590267 Solanum lycopersicum
Solyc08g081570.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 64575474-64585473 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121468596 5263 Asterids View MSA
123737612 5271 Pentapetalae View MSA
122786124 5272 Eudicot View MSA
122042234 5273 Angiosperm View MSA
121344039 5274 Embryophyte View MSA
123423768 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain