Gene : Solyc08g077250.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR13428 - INNER NUCLEAR MEMBRANE PROTEIN MAN1 LEM DOMAIN CONTAINING PROTEIN Description:  Genomic DNA chromosome 5 BAC clone F10E10 (AHRD V1 ***- Q9LS27_ARATH); contains Interpro domain(s) IPR018996 Inner nuclear membrane protein MAN1, C-terminal
Genomic Order:  1853 Name:  ? Solyc08g077250.2
Secondary Identifier:  ? PAC:36150679
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g077250.2 0.5kb upstream 0.5kb upstream 5232 true SL2.50ch08: 61176092-61181323 Solanum lycopersicum
Solyc08g077250.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 61180824-61181323 Solanum lycopersicum
Solyc08g077250.2 0.5kb downstream 0.5kb downstream 5232 true SL2.50ch08: 61175592-61180823 Solanum lycopersicum
Solyc08g077250.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 61175592-61176091 Solanum lycopersicum
Solyc08g077250.2 1.0kb upstream 1.0kb upstream 5732 true SL2.50ch08: 61176092-61181823 Solanum lycopersicum
Solyc08g077250.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 61180824-61181823 Solanum lycopersicum
Solyc08g077250.2 1.0kb downstream 1.0kb downstream 5732 true SL2.50ch08: 61175092-61180823 Solanum lycopersicum
Solyc08g077250.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 61175092-61176091 Solanum lycopersicum
Solyc08g077250.2 2.0kb upstream 2.0kb upstream 6732 true SL2.50ch08: 61176092-61182823 Solanum lycopersicum
Solyc08g077250.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 61180824-61182823 Solanum lycopersicum
Solyc08g077250.2 2.0kb downstream 2.0kb downstream 6732 true SL2.50ch08: 61174092-61180823 Solanum lycopersicum
Solyc08g077250.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 61174092-61176091 Solanum lycopersicum
Solyc08g077250.2 5.0kb upstream 5.0kb upstream 9732 true SL2.50ch08: 61176092-61185823 Solanum lycopersicum
Solyc08g077250.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 61180824-61185823 Solanum lycopersicum
Solyc08g077250.2 5.0kb downstream 5.0kb downstream 9732 true SL2.50ch08: 61171092-61180823 Solanum lycopersicum
Solyc08g077250.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 61171092-61176091 Solanum lycopersicum
Solyc08g077250.2 10.0kb upstream 10.0kb upstream 14732 true SL2.50ch08: 61176092-61190823 Solanum lycopersicum
Solyc08g077250.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 61180824-61190823 Solanum lycopersicum
Solyc08g077250.2 10.0kb downstream 10.0kb downstream 14732 true SL2.50ch08: 61166092-61180823 Solanum lycopersicum
Solyc08g077250.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 61166092-61176091 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469461 5263 Asterids View MSA
123738040 5271 Pentapetalae View MSA
122785775 5272 Eudicot View MSA
122043959 5273 Angiosperm View MSA
121347546 5274 Embryophyte View MSA
123380568 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain