Gene : Solyc08g077200.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR10210//PTHR10210:SF50 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE // SUBFAMILY NOT NAMED Description:  Ribose-phosphate pyrophosphokinase (AHRD V1 ***- D7KHJ9_ARALY); contains Interpro domain(s) IPR005946 Phosphoribosyl pyrophosphokinase
Genomic Order:  1848 Name:  ? Solyc08g077200.2
Secondary Identifier:  ? PAC:36151150
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Slycopersicum PWY0-662 Solanum lycopersicum pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g077200.2 0.5kb upstream 0.5kb upstream 6169 true SL2.50ch08: 61101356-61107524 Solanum lycopersicum
Solyc08g077200.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 61101356-61101855 Solanum lycopersicum
Solyc08g077200.2 0.5kb downstream 0.5kb downstream 6169 true SL2.50ch08: 61101856-61108024 Solanum lycopersicum
Solyc08g077200.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 61107525-61108024 Solanum lycopersicum
Solyc08g077200.2 1.0kb upstream 1.0kb upstream 6669 true SL2.50ch08: 61100856-61107524 Solanum lycopersicum
Solyc08g077200.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 61100856-61101855 Solanum lycopersicum
Solyc08g077200.2 1.0kb downstream 1.0kb downstream 6669 true SL2.50ch08: 61101856-61108524 Solanum lycopersicum
Solyc08g077200.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 61107525-61108524 Solanum lycopersicum
Solyc08g077200.2 2.0kb upstream 2.0kb upstream 7669 true SL2.50ch08: 61099856-61107524 Solanum lycopersicum
Solyc08g077200.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 61099856-61101855 Solanum lycopersicum
Solyc08g077200.2 2.0kb downstream 2.0kb downstream 7669 true SL2.50ch08: 61101856-61109524 Solanum lycopersicum
Solyc08g077200.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 61107525-61109524 Solanum lycopersicum
Solyc08g077200.2 5.0kb upstream 5.0kb upstream 10669 true SL2.50ch08: 61096856-61107524 Solanum lycopersicum
Solyc08g077200.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 61096856-61101855 Solanum lycopersicum
Solyc08g077200.2 5.0kb downstream 5.0kb downstream 10669 true SL2.50ch08: 61101856-61112524 Solanum lycopersicum
Solyc08g077200.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 61107525-61112524 Solanum lycopersicum
Solyc08g077200.2 10.0kb upstream 10.0kb upstream 15669 true SL2.50ch08: 61091856-61107524 Solanum lycopersicum
Solyc08g077200.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 61091856-61101855 Solanum lycopersicum
Solyc08g077200.2 10.0kb downstream 10.0kb downstream 15669 true SL2.50ch08: 61101856-61117524 Solanum lycopersicum
Solyc08g077200.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 61107525-61117524 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121479568 5263 Asterids View MSA
123749025 5271 Pentapetalae View MSA
122788028 5272 Eudicot View MSA
122042217 5273 Angiosperm View MSA
121347994 5274 Embryophyte View MSA
123427852 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain