Gene : Solyc08g076410.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR21087:SF0 - INACTIVE SHIKIMATE KINASE LIKE 2, CHLOROPLASTIC-RELATED Description:  Shikimate kinase-like protein (AHRD V1 **-- B9GZJ5_POPTR); contains Interpro domain(s) IPR017447 CS
Genomic Order:  1771 Name:  ? Solyc08g076410.2
Secondary Identifier:  ? PAC:36150837
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g076410.2 0.5kb upstream 0.5kb upstream 4827 true SL2.50ch08: 60423545-60428371 Solanum lycopersicum
Solyc08g076410.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 60423545-60424044 Solanum lycopersicum
Solyc08g076410.2 0.5kb downstream 0.5kb downstream 4827 true SL2.50ch08: 60424045-60428871 Solanum lycopersicum
Solyc08g076410.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 60428372-60428871 Solanum lycopersicum
Solyc08g076410.2 1.0kb upstream 1.0kb upstream 5327 true SL2.50ch08: 60423045-60428371 Solanum lycopersicum
Solyc08g076410.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 60423045-60424044 Solanum lycopersicum
Solyc08g076410.2 1.0kb downstream 1.0kb downstream 5327 true SL2.50ch08: 60424045-60429371 Solanum lycopersicum
Solyc08g076410.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 60428372-60429371 Solanum lycopersicum
Solyc08g076410.2 2.0kb upstream 2.0kb upstream 6327 true SL2.50ch08: 60422045-60428371 Solanum lycopersicum
Solyc08g076410.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 60422045-60424044 Solanum lycopersicum
Solyc08g076410.2 2.0kb downstream 2.0kb downstream 6327 true SL2.50ch08: 60424045-60430371 Solanum lycopersicum
Solyc08g076410.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 60428372-60430371 Solanum lycopersicum
Solyc08g076410.2 5.0kb upstream 5.0kb upstream 9327 true SL2.50ch08: 60419045-60428371 Solanum lycopersicum
Solyc08g076410.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 60419045-60424044 Solanum lycopersicum
Solyc08g076410.2 5.0kb downstream 5.0kb downstream 9327 true SL2.50ch08: 60424045-60433371 Solanum lycopersicum
Solyc08g076410.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 60428372-60433371 Solanum lycopersicum
Solyc08g076410.2 10.0kb upstream 10.0kb upstream 14327 true SL2.50ch08: 60414045-60428371 Solanum lycopersicum
Solyc08g076410.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 60414045-60424044 Solanum lycopersicum
Solyc08g076410.2 10.0kb downstream 10.0kb downstream 14327 true SL2.50ch08: 60424045-60438371 Solanum lycopersicum
Solyc08g076410.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 60428372-60438371 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121476727 5263 Asterids View MSA
123746382 5271 Pentapetalae View MSA
122790414 5272 Eudicot View MSA
122043641 5273 Angiosperm View MSA
121347570 5274 Embryophyte View MSA
123427676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain