Gene : Solyc08g076670.2 S. lycopersicum ITAG2.4
Defline:  (1 of 4) KOG3140 - Predicted membrane protein Description:  Transmembrane protein 41B (AHRD V1 **-- TM41B_HUMAN); contains Interpro domain(s) IPR015414 SNARE associated Golgi protein
Genomic Order:  1796 Name:  ? Solyc08g076670.2
Secondary Identifier:  ? PAC:36149752
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g076670.2 0.5kb upstream 0.5kb upstream 3845 true SL2.50ch08: 60599857-60603701 Solanum lycopersicum
Solyc08g076670.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 60603202-60603701 Solanum lycopersicum
Solyc08g076670.2 0.5kb downstream 0.5kb downstream 3845 true SL2.50ch08: 60599357-60603201 Solanum lycopersicum
Solyc08g076670.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 60599357-60599856 Solanum lycopersicum
Solyc08g076670.2 1.0kb upstream 1.0kb upstream 4345 true SL2.50ch08: 60599857-60604201 Solanum lycopersicum
Solyc08g076670.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 60603202-60604201 Solanum lycopersicum
Solyc08g076670.2 1.0kb downstream 1.0kb downstream 4345 true SL2.50ch08: 60598857-60603201 Solanum lycopersicum
Solyc08g076670.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 60598857-60599856 Solanum lycopersicum
Solyc08g076670.2 2.0kb upstream 2.0kb upstream 5345 true SL2.50ch08: 60599857-60605201 Solanum lycopersicum
Solyc08g076670.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 60603202-60605201 Solanum lycopersicum
Solyc08g076670.2 2.0kb downstream 2.0kb downstream 5345 true SL2.50ch08: 60597857-60603201 Solanum lycopersicum
Solyc08g076670.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 60597857-60599856 Solanum lycopersicum
Solyc08g076670.2 5.0kb upstream 5.0kb upstream 8345 true SL2.50ch08: 60599857-60608201 Solanum lycopersicum
Solyc08g076670.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 60603202-60608201 Solanum lycopersicum
Solyc08g076670.2 5.0kb downstream 5.0kb downstream 8345 true SL2.50ch08: 60594857-60603201 Solanum lycopersicum
Solyc08g076670.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 60594857-60599856 Solanum lycopersicum
Solyc08g076670.2 10.0kb upstream 10.0kb upstream 13345 true SL2.50ch08: 60599857-60613201 Solanum lycopersicum
Solyc08g076670.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 60603202-60613201 Solanum lycopersicum
Solyc08g076670.2 10.0kb downstream 10.0kb downstream 13345 true SL2.50ch08: 60589857-60603201 Solanum lycopersicum
Solyc08g076670.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 60589857-60599856 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469084 5263 Asterids View MSA
123751002 5271 Pentapetalae View MSA
122793414 5272 Eudicot View MSA
122043784 5273 Angiosperm View MSA
121348714 5274 Embryophyte View MSA
123428145 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain