Gene : Solyc08g078600.2 S. lycopersicum ITAG2.4
Defline:  (1 of 2) K14721 - DNA-directed RNA polymerase III subunit RPC5 (RPC5, POLR3E) Description:  DNA-directed RNA polymerase III subunit RPC5-like protein (AHRD V1 *-*- D0NBY8_PHYIN); contains Interpro domain(s) IPR006886 Sin-like protein conserved region
Genomic Order:  1987 Name:  ? Solyc08g078600.2
Secondary Identifier:  ? PAC:36150011
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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g078600.2 0.5kb upstream 0.5kb upstream 8560 true SL2.50ch08: 62371321-62379880 Solanum lycopersicum
Solyc08g078600.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 62379381-62379880 Solanum lycopersicum
Solyc08g078600.2 0.5kb downstream 0.5kb downstream 8560 true SL2.50ch08: 62370821-62379380 Solanum lycopersicum
Solyc08g078600.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 62370821-62371320 Solanum lycopersicum
Solyc08g078600.2 1.0kb upstream 1.0kb upstream 9060 true SL2.50ch08: 62371321-62380380 Solanum lycopersicum
Solyc08g078600.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 62379381-62380380 Solanum lycopersicum
Solyc08g078600.2 1.0kb downstream 1.0kb downstream 9060 true SL2.50ch08: 62370321-62379380 Solanum lycopersicum
Solyc08g078600.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 62370321-62371320 Solanum lycopersicum
Solyc08g078600.2 2.0kb upstream 2.0kb upstream 10060 true SL2.50ch08: 62371321-62381380 Solanum lycopersicum
Solyc08g078600.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 62379381-62381380 Solanum lycopersicum
Solyc08g078600.2 2.0kb downstream 2.0kb downstream 10060 true SL2.50ch08: 62369321-62379380 Solanum lycopersicum
Solyc08g078600.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 62369321-62371320 Solanum lycopersicum
Solyc08g078600.2 5.0kb upstream 5.0kb upstream 13060 true SL2.50ch08: 62371321-62384380 Solanum lycopersicum
Solyc08g078600.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 62379381-62384380 Solanum lycopersicum
Solyc08g078600.2 5.0kb downstream 5.0kb downstream 13060 true SL2.50ch08: 62366321-62379380 Solanum lycopersicum
Solyc08g078600.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 62366321-62371320 Solanum lycopersicum
Solyc08g078600.2 10.0kb upstream 10.0kb upstream 18060 true SL2.50ch08: 62371321-62389380 Solanum lycopersicum
Solyc08g078600.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 62379381-62389380 Solanum lycopersicum
Solyc08g078600.2 10.0kb downstream 10.0kb downstream 18060 true SL2.50ch08: 62361321-62379380 Solanum lycopersicum
Solyc08g078600.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 62361321-62371320 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121467995 5263 Asterids View MSA
123749161 5271 Pentapetalae View MSA
122792104 5272 Eudicot View MSA
122041798 5273 Angiosperm View MSA
123429138 5275 Viridiplantae View MSA
121344108 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain