Gene : Solyc08g078470.2 S. lycopersicum ITAG2.4
Defline:  (1 of 1) PTHR23308:SF34 - F16B3.3 PROTEIN Description:  FHA domain containing protein expressed (AHRD V1 *-*- Q6ATJ5_ORYSJ); contains Interpro domain(s) IPR000253 Forkhead-associated
Genomic Order:  1974 Name:  ? Solyc08g078470.2
Secondary Identifier:  ? PAC:36150400
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Solyc08g078470.2 0.5kb upstream 0.5kb upstream 3763 true SL2.50ch08: 62265282-62269044 Solanum lycopersicum
Solyc08g078470.2 0.5kb upstream 0.5kb upstream 500 false SL2.50ch08: 62268545-62269044 Solanum lycopersicum
Solyc08g078470.2 0.5kb downstream 0.5kb downstream 3763 true SL2.50ch08: 62264782-62268544 Solanum lycopersicum
Solyc08g078470.2 0.5kb downstream 0.5kb downstream 500 false SL2.50ch08: 62264782-62265281 Solanum lycopersicum
Solyc08g078470.2 1.0kb upstream 1.0kb upstream 4263 true SL2.50ch08: 62265282-62269544 Solanum lycopersicum
Solyc08g078470.2 1.0kb upstream 1.0kb upstream 1000 false SL2.50ch08: 62268545-62269544 Solanum lycopersicum
Solyc08g078470.2 1.0kb downstream 1.0kb downstream 4263 true SL2.50ch08: 62264282-62268544 Solanum lycopersicum
Solyc08g078470.2 1.0kb downstream 1.0kb downstream 1000 false SL2.50ch08: 62264282-62265281 Solanum lycopersicum
Solyc08g078470.2 2.0kb upstream 2.0kb upstream 5263 true SL2.50ch08: 62265282-62270544 Solanum lycopersicum
Solyc08g078470.2 2.0kb upstream 2.0kb upstream 2000 false SL2.50ch08: 62268545-62270544 Solanum lycopersicum
Solyc08g078470.2 2.0kb downstream 2.0kb downstream 5263 true SL2.50ch08: 62263282-62268544 Solanum lycopersicum
Solyc08g078470.2 2.0kb downstream 2.0kb downstream 2000 false SL2.50ch08: 62263282-62265281 Solanum lycopersicum
Solyc08g078470.2 5.0kb upstream 5.0kb upstream 8263 true SL2.50ch08: 62265282-62273544 Solanum lycopersicum
Solyc08g078470.2 5.0kb upstream 5.0kb upstream 5000 false SL2.50ch08: 62268545-62273544 Solanum lycopersicum
Solyc08g078470.2 5.0kb downstream 5.0kb downstream 8263 true SL2.50ch08: 62260282-62268544 Solanum lycopersicum
Solyc08g078470.2 5.0kb downstream 5.0kb downstream 5000 false SL2.50ch08: 62260282-62265281 Solanum lycopersicum
Solyc08g078470.2 10.0kb upstream 10.0kb upstream 13263 true SL2.50ch08: 62265282-62278544 Solanum lycopersicum
Solyc08g078470.2 10.0kb upstream 10.0kb upstream 10000 false SL2.50ch08: 62268545-62278544 Solanum lycopersicum
Solyc08g078470.2 10.0kb downstream 10.0kb downstream 13263 true SL2.50ch08: 62255282-62268544 Solanum lycopersicum
Solyc08g078470.2 10.0kb downstream 10.0kb downstream 10000 false SL2.50ch08: 62255282-62265281 Solanum lycopersicum

6 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121469855 5263 Asterids View MSA
123743781 5271 Pentapetalae View MSA
122792695 5272 Eudicot View MSA
122045754 5273 Angiosperm View MSA
121310497 5274 Embryophyte View MSA
123427201 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain